Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0469 ATGAACATGGAGAGAGAACACCAAAATGCAACACTGAAATCACCATTGATTCAAAACTCAGGAGAAGATAGATTAATAGTTGATGATGAAGAACATAACAAGTCAAGTGGTATAGGAGAAAGAACAGAAATCATTGAAGAAGTGAAGAAACAGTTATGGCTAGCAGGGCCTTTGATATCTGTGAGCCTATTAAATTATTGCCTACAAGTTATATCTGTTATGTTTGTAGGACATCTTGGGGAACTTGCTCTCTCTGGAGCTTCCATGGCCACTTCTTTTGCCTCTGTCACAGTTGCGGTGAGCTCCGCAACCGCATCACACCGTAATTATGGTGTGACACCAAATCACAATATTGTGGCCGCAACGCAATCACATCGGACCACATTTGAGCTGCATCGGATGGGATTGGCAAGTGCCTTGGACACCCTATGTGGCCAATCATATGGGGCAAAGCAGCACAAAATGTTAGGCATACAAATGCAAAGAGCCATGTTCATTCTTATGATTGTTAGCATTCCACTTTCATTCATTTGGGCAAACACAAAATCCATTCTTCTTTTCCTTGGCCAAGATCCTGAAATTTCTATAGAAGCTGGGAACTATGCACAACTAATGATTCCAACCATTTTTGCCTATGGCCTTCTTCAGTGCTTAAACAGATTCTTACAAACCCAAAATATTGTATTTCCAATGATGTTATTTGCAGGAATGACCACTTTACTACATATTCTTGTATGTTGGTTTATGGTATTCAAGTCTGGACTAGGAGGCAGAGGCGCCGCCGTAGCGAATTCTATATCTTACTGGGTTAATGTTTTGATGCTTTTACTCTATGTCAAGTTTTCTCCTTCATGTAAAGAAACTTGGACAGGGTTTTCCAAAGAGGCATTGAAAAATATCCCTCAATTTCTCTTGCTTGCTATACCTTCAGCAGTTATGGTTTGCTTGGAAATGTGGTCATTTGAATTGATGGTTCTACTTTCTGGTCTTCTTCCAAATCCGAAGTTGGAAACATCAGTACTTTCTGTCTGCTTGAATACAGCTGCAACTGTTTGGATGATCCCTTTTGGACTCAGTGGAGCTGTAAGCACTCGTATCTCAAATGAACTTGGAGCTGGTAATCCAAAAGCTGCACGTTTAGCAGTGTTTGTTGTCTTAGCAATGACATTGATTATGGCCATCATAGTTGGAACCGTGATAATACTAATACGCAATATTTGGGGATATGCCTATAGTAATGAAGTAGAAGTGGTCAAATATGTAGCAATTATGATGCCAATTCTTGCAATATCCAGTTTTCTGGATTCATTTCAATGTGTTCTTTCAGGTGTTGCTAGAGGATGTGGATGGCAGAAAATTGGTGCCATTGTAAATCTGGGGTCATACTATTTAGTTGGGATCCCAGCAGCTATTGTATTAGCTTTTGTTTTGCATATTGGTGGGAAGGGGCTCTGGCTGGGGATTATATCTGCACTTATTGTTCAAGCAATGTCTCTACTAATAATTACTATACGTACTGACTGGGATCAAGAGGCAAAGAAGGCTACAGATAGAGTTTATGATTCAATAATACCAGAGAGAATAGCATGA 1590 0.3987 MNMEREHQNATLKSPLIQNSGEDRLIVDDEEHNKSSGIGERTEIIEEVKKQLWLAGPLISVSLLNYCLQVISVMFVGHLGELALSGASMATSFASVTVAVSSATASHRNYGVTPNHNIVAATQSHRTTFELHRMGLASALDTLCGQSYGAKQHKMLGIQMQRAMFILMIVSIPLSFIWANTKSILLFLGQDPEISIEAGNYAQLMIPTIFAYGLLQCLNRFLQTQNIVFPMMLFAGMTTLLHILVCWFMVFKSGLGGRGAAVANSISYWVNVLMLLLYVKFSPSCKETWTGFSKEALKNIPQFLLLAIPSAVMVCLEMWSFELMVLLSGLLPNPKLETSVLSVCLNTAATVWMIPFGLSGAVSTRISNELGAGNPKAARLAVFVVLAMTLIMAIIVGTVIILIRNIWGYAYSNEVEVVKYVAIMMPILAISSFLDSFQCVLSGVARGCGWQKIGAIVNLGSYYLVGIPAAIVLAFVLHIGGKGLWLGIISALIVQAMSLLIITIRTDWDQEAKKATDRVYDSIIPERIA 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0469 529 CDD MATE_eukaryotic 47 514 IPR045069 GO:0042910|GO:1990961
Lal25g0469 529 PANTHER PROTEIN DETOXIFICATION 27 98 - -
Lal25g0469 529 PANTHER PROTEIN DETOXIFICATION 134 518 - -
Lal25g0469 529 PANTHER MULTIDRUG RESISTANCE PROTEIN 134 518 - -
Lal25g0469 529 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 98 - -
Lal25g0469 529 Pfam MatE 134 247 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal25g0469 529 Pfam MatE 309 471 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal25g0469 529 TIGRFAM matE: MATE efflux family protein 133 485 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0469 Lal-Chr25 3239848 3243767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0469 K03327 - gmx:100792588 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0469 25 3239848 3243767 Lal25g0469 25 3239848 3243767 ECH
Lal8g0458 8 3050541 3053536 Lal25g0469 25 3239848 3243767 LSH
Lal25g0469 25 3239848 3243767 Lal23g0683 23 9524572 9528110 PCT