Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0281 ATGGTTGTTATGGCCTTCAACAAACTCATAGAAATGTGGAATGTGAGAGTTGTGTTGTTGCTGCTAGCATCTTCACTTCTTGGTTTTGCTACAGCTTCTGTGTCTTATGACTCTAAAGCTATCACAATTAATGGCCAAAGAAGGATCCTCATTTCTGGATCCATTCATTACCCCAGAAGCACTCCTGAGATGTGGCCAGATCTTATCCAGAAGGCCAAGGAAGGAGGTATGGATGTAATTCAAACTTATGTATTCTGGAATGGGCATGAACCTGAACCTGGCCAATATTATTTTGAGGGGAACTATGATCTGGTGAAGTTCGTAAAGTTGGTACAACAAGCAGGCCTTTATGTTAATCTCAGGATTGGTCCTTATGTCTGTGCTGAGTGGAATTTTGGGGGTTTCCCTGTTTGGCTGAAGTATATTCCAGGTATCAGCTTCAGAACAGACAATGGCCCTTTTAAGTTTCAAATGCAAAAATTTACTGAGAAGATTGTCAGAATGATGAAAGCAGAAAGGTTATATGAGTCTCAAGGAGGTCCAATAATTCTATCCCAGATTGAAAATGAATATGGACCTATGGAGTATGAAATCGGCGCCCCGGGGAAATCCTACACTAAGTGGGCTGCAAATATGGCTCAAGGACTTGGTACTGGGGTTCCATGGATCATGTGCAAGCAAGATGATGCTCCTGATCCTATTGTAAGCTCAGCTGAAGTGTATCATTTTTACGAAAATATTTTTACCTTTTATAGACATATTAATACTTGCAACGGTTTCTATTGTGATTATTTCTCTCCAAATTCAGCTTACAAGCCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTCACGGAGTTTGGAGGTCCAGTTCCTTATCGACCGGCTGAAGACTTAGCATTCTCGGTTGCAAGGTTTATACAGAAAGGGGGATCATTTGTCAATTATTACATGTATCACGGGGGAACAAATTTTGGTCGCACTGCTGGTGGGCCTTTTATTGCTACAAGCTATGATTATGATGCACCTCTGGATGAATATGGATTACTTAGGCAGCCAAAGTGGGGTCATCTGAAGGATTTACACAGAGCATTAAAACTCTGTGAACCTGCTTTAGTATCTGCAGATCCTACTGTAACACAGATTGGAAACTATCAAGAGGCTCATGTCTTTAAATCAAAGTCGGGAGCTTGTGCTGCATTCCTTGCAAACTACAACCCAAAATCCTATGCAAAGGTGGCATTTGGAAATATGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGACTGCAATCACACCGTTTACAACACTGCACGGATCGGTTCTCAGAGTGCACAGATGAAGATGACTCGTGTACCTATTCATGGCGGACTCTCTTGGAAAGAATTCAGTGAAGAAACAGCTTCTACTGATGATAGTACATTCACCATGGTTGGCCTGTTGGAGCAGTTAAATACAACAAGAGATTTATCTGACTACTTGTGGTACTCCACGGATGTCGTGATTGATCCCAATGAAGGATTTTTGTGGAAAGGAACCAATCCTGTTCTTACAGTATTATCTGCTGGGCATGCTTTGCATGTTTTTGTCAATGGTCAGCTATCAGGAACTATATACGGAAGCTTAGAATTCCCTAAGCTAACATTTAGCGAGGGTGTAAAGCTCAGAGCTGGTGTTAACAAAATCTCTCTTCTAAGTGTTGCAGTTGGACTCCCGAATGTTGGTCCACATTTTGAAACATGGAATGCTGGTGTTCTTGGTCCAATTACATTAAATGGCCTCATCGAGGGGAGAAGGGACTTGTCTTGGCAGAAATGGTCTTACAAGGTTGGTCTTAAAGGTGAAACACTGAGTCTTCATTCTCTCAGTGGAAGTTCCACAGTGGAGTGGATTCAAGGGTCTTTAATTTCTCAAAAGCAGCCATTGACTTGGTACAAAACTACTTTTGATGCCCCGGCTGGAGTTGCACCATTTGCTTTAGACATGGGCAGCATGGGCAAAGGTCAAGTTTGGCTAAATGGACAGAGTCTCGGCCGCTACTGGCCTGCTTATAAAGCAACTGGTACCTGTGATTATTGCAGCTATGCTGGAACTTATACTGAGACCAAATGCAGAAGTAACTGTGGCGAGGCTTCACAAAAATGGTATCATGTTCCTCATTCGTGGCTGAAGCCAACTGGTAACTTATTGGTTGTGTTTGAAGAATTAGGTGGAGATCCCAATGGGATCTTTTTGGTTAGAAGGGATATCGATAGCGTGTGCGCTGATATTTATGAGTGGCAACCAAATCTTATCAGTTATCAGATGCAAGTTTCTGGCAAAGTTAGCAAACCTGTTAGACCGAAAGCACATTTATCATGTGGCCCTGGACAGAAAATTTCGTCAATCAAATTCGCTAGCTTTGGTACTCCATTAGGATCTTGTGGAAATTTCCTTCAAGGAGGCTGTCATGCTCACAATTCATATGATGCCTTTGAAAGGAATTGTGTTGGACAGAAGTGGTGCACAGTAACTTTGTCACCTGAAATTTTTGGAGGAGATCCATGCCCAAATGTGATGAAGAAACTGGCAGTGGAAGCTGTTTGCACCTGA 2601 0.4237 MVVMAFNKLIEMWNVRVVLLLLASSLLGFATASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLIQKAKEGGMDVIQTYVFWNGHEPEPGQYYFEGNYDLVKFVKLVQQAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNGPFKFQMQKFTEKIVRMMKAERLYESQGGPIILSQIENEYGPMEYEIGAPGKSYTKWAANMAQGLGTGVPWIMCKQDDAPDPIVSSAEVYHFYENIFTFYRHINTCNGFYCDYFSPNSAYKPKMWTEAWTGWFTEFGGPVPYRPAEDLAFSVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRALKLCEPALVSADPTVTQIGNYQEAHVFKSKSGACAAFLANYNPKSYAKVAFGNMHYNLPPWSISILPDCNHTVYNTARIGSQSAQMKMTRVPIHGGLSWKEFSEETASTDDSTFTMVGLLEQLNTTRDLSDYLWYSTDVVIDPNEGFLWKGTNPVLTVLSAGHALHVFVNGQLSGTIYGSLEFPKLTFSEGVKLRAGVNKISLLSVAVGLPNVGPHFETWNAGVLGPITLNGLIEGRRDLSWQKWSYKVGLKGETLSLHSLSGSSTVEWIQGSLISQKQPLTWYKTTFDAPAGVAPFALDMGSMGKGQVWLNGQSLGRYWPAYKATGTCDYCSYAGTYTETKCRSNCGEASQKWYHVPHSWLKPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLISYQMQVSGKVSKPVRPKAHLSCGPGQKISSIKFASFGTPLGSCGNFLQGGCHAHNSYDAFERNCVGQKWCTVTLSPEIFGGDPCPNVMKKLAVEAVCT 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0281 866 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 179 191 IPR019801 GO:0004553|GO:0005975
Lal8g0281 866 PRINTS Glycosyl hydrolase family 35 signature 44 61 IPR001944 GO:0004553|GO:0005975
Lal8g0281 866 PRINTS Glycosyl hydrolase family 35 signature 65 83 IPR001944 GO:0004553|GO:0005975
Lal8g0281 866 PRINTS Glycosyl hydrolase family 35 signature 120 139 IPR001944 GO:0004553|GO:0005975
Lal8g0281 866 PRINTS Glycosyl hydrolase family 35 signature 177 192 IPR001944 GO:0004553|GO:0005975
Lal8g0281 866 PRINTS Glycosyl hydrolase family 35 signature 275 290 IPR001944 GO:0004553|GO:0005975
Lal8g0281 866 PRINTS Glycosyl hydrolase family 35 signature 312 327 IPR001944 GO:0004553|GO:0005975
Lal8g0281 866 PRINTS Glycosyl hydrolase family 35 signature 332 348 IPR001944 GO:0004553|GO:0005975
Lal8g0281 866 PRINTS Glycosyl hydrolase family 35 signature 643 657 IPR001944 GO:0004553|GO:0005975
Lal8g0281 866 PRINTS Glycosyl hydrolase family 35 signature 670 686 IPR001944 GO:0004553|GO:0005975
Lal8g0281 866 Pfam Beta-sandwich domain in beta galactosidase 372 443 IPR041392 -
Lal8g0281 866 Gene3D - 466 610 - -
Lal8g0281 866 PANTHER BETA-GALACTOSIDASE 13 860 - -
Lal8g0281 866 Pfam Glycosyl hydrolases family 35 41 364 IPR031330 -
Lal8g0281 866 Pfam Galactose binding lectin domain 788 865 IPR000922 GO:0030246
Lal8g0281 866 Gene3D Glycosidases 30 369 - -
Lal8g0281 866 SUPERFAMILY Galactose-binding domain-like 427 595 IPR008979 -
Lal8g0281 866 Gene3D - 779 866 IPR043159 -
Lal8g0281 866 SUPERFAMILY Galactose-binding domain-like 607 770 IPR008979 -
Lal8g0281 866 Gene3D - 619 757 - -
Lal8g0281 866 ProSiteProfiles SUEL-type lectin domain profile. 780 866 IPR000922 GO:0030246
Lal8g0281 866 PANTHER BETA-GALACTOSIDASE RELATED 13 860 IPR001944 GO:0004553|GO:0005975
Lal8g0281 866 SUPERFAMILY (Trans)glycosidases 34 369 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0281 Lal-Chr8 1888794 1895323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0281 12 866 Glycoside Hydrolase AT3G13750 78.231 0.0 1422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0281 - - gmx:100811187 1573.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0281 8 1888794 1895323 Lal8g0281 8 1888794 1895323 ECH
Lal25g0324 25 2215477 2222528 Lal8g0281 8 1888794 1895323 LSH
Lal8g0281 8 1888794 1895323 Lal20g1095 20 15098614 15106608 PCT
Lal8g0281 8 1888794 1895323 Lal18g0148 18 1171197 1177848 PCT
Lal20g1095 20 15098614 15106608 Lal8g0281 8 1888794 1895323 PCT
Lal18g0148 18 1171197 1177848 Lal8g0281 8 1888794 1895323 PCT