Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1095 ATGGACTTCAACCTCATTATGTGGAGGAATGTGCTACTTCTTCTGGTGGTGCTATCATTTTCACTGATTGGTCATGTTTCTGCTTCTGTTTCATATGACCATAATGCCATTACCATCAATGGACAAAGAAAAATACTGCTTTCTGGATCCATTCATTACCCCAGAAGCACTTCTGAGATGTGGCCAGGTCTTATCCAGAAGGCTAAGGAAGGAGGTTTAGATGTGATTCAGACTTATGTTTTCTGGAATGGGCATGAACCTTCACCTGGCAAATACCATTTTGAGGGGAACTATGATCTTGTGAAGTTCATAAAGCTGGTGCAGCAAGCAGGCCTTTATGTTCACCTTAGAATTGGTCCTTATGTCTGTGCTGAATGGAACTTTGGTGGTTTCCCTGTTTGGCTTAAGTACATTCCAAATATCAACTTTAGAACAAACAATGGACCATTTAAGTTTCAAATGCAAAAATTTACCACAAAGATTGTGAATATGATGAAAGCAGAAAGGTTATATGAGTCTCAGGGTGGTCCAATAATTCTATCTCAGATAGAAAATGAATATGGACCTATGGAGTATGAAATTGGTGCTCCTGGCAAAGCCTATACTCAGTGGGCAGCACATATGGCTATTGGACTTGGTACTGGGGTTCCATGGGTCATGTGCAAGCAAGATGATGCTCCTGATCCTATTATTAACACTTGTAATGGCTTCTATTGTGATTATTTCTCTCCAAATAAAGCTTACAAACCAAAGATGTGGACAGAAGCATGGACTGGCTGGTTTACCGAGTTCGGAGGTTCGGTTCCTCATAGACCTGCTGAGGACTTGGCATTTTCTGTTGCAAGGTTTATCCAAAAGGGAGGATCATTTGTCAATTATTATATGTATCACGGGGGAACAAATTTCGGTCGAACCGCTGGTGGTCCGTTTATTGCTACAAGCTATGACTATGATGCACCTCTTGATGAATATGGACTTCTCAGGCAACCAAAGTGGGGTCATCTAAAGGATTTACACAGAGCAATAAAACTCTGTGAACCTGCTTTAGTATCCGGGGATCCTACCGTAACACGGCTCGGAAACTATCAAGAGGCTCATGTCTTTAAATATAAGGCTGGAGGTTGTGCTGCATTTCTTGCAAATTATGACTCGCGATCTTATGCAACGGTGGCATTCGGAAATTCACATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCAGATTGCAAGCACACTGTTTATAACACTGCAAGGGTTGGTTCCCAGAGTGCACAGATGAAGATGACTCGAATTCCGATTCACGGAGGACTCTCTTGGAGTGCATTCAATGAAGAAACAACCTCAACCGATGATAGTTCTTTCACCCTGACTGGTCTATTGGAGCAGTTAAACATAACAAGAGATTTATCTGACTACTTGTGGTACTCCACAGATGTTGTGATCAATTCGAACGAAGGATTTTTGAGGAACGAAAAGAGTCCCGTCCTTACGGTATTATCTGCAGGACATGCTTTGCATGTTTTTGTCAATGGTCAGCTATCAGGAACTGCTTATGGAAGCTTAGAATTCCCTAAAGTCACCTTTAGTGAGAGTGTGAATCTTAGAGTCGGCGTTAACAAAATCTCTTTGCTAAGCGTTGCAGTTGGGCTCCCGAATGTTGGTCCACATTTTGAAAGATGGAATGCTGGTGTTCTTGGTCCAATTACATTAAATGGTCTCAATGATGGAAGAAGGGACTTAACTTGGCAGAAATGGTCTTACAAGGTTGGTCTTAAAGGTGAAGCCTTAAGTCTTCATTCTCTTAGTGGAAGTTCCTCTGTTGATTGGCTTCAAGGATTTTTAGTTTCTCAAAGGCATCCATTGACTTGGTACAAAACTACATTTGATGCCCCGATCGGAATTGCACCGTTGGCTTTAGACATGGGAAGTATGGGCAAAGGTCAAGTGTGGATAAATGGACAGAACATAGGCCGATATTGGCCGGCTTATAAAGCATCCGGTTCTTGTGAATACTGTAACTATGCAGGAACTTATGATGAGAAGAAATGCAAAAGTAACTGCGGCGAAGCGTCTCAGAGATGGTACCATGTTCCTCATTCAATGCTGAAGCCGACTGGAAATTTATTGGTCGTGTTCGAGGAATTAGGTGGAGACCCAAATGGTATATTTTTGGTTAGAAGGGATATAGATAGTGTATGTGCTGATATTTATGAGTGGCAGCCAAATCTTGTAAGTTATCAAATGCAATCTTCTGGCAAAGTTAGCAAACCTGTGAGGCCAAAAGCACATTTGTCATGTGGTATTGGACAGAAAATCTCATCAATCAAATTTGCTAGCTTTGGAACTCCAATAGGGTCTTGTGGAAACTACCATGAAGGAAGTTGTCATGCACACAATTCATATGATGCCTTTCAAAGGAATTGTGTTGGGAAGAGCTTGTGCACAGTGACAGTGTCACCAGAAATTTTTGGAGGAGATCCATGTCCTAATGTAATGAAGAAACTCTCAGTGGAGGCTATTTGCACTTAA 2532 0.4163 MDFNLIMWRNVLLLLVVLSFSLIGHVSASVSYDHNAITINGQRKILLSGSIHYPRSTSEMWPGLIQKAKEGGLDVIQTYVFWNGHEPSPGKYHFEGNYDLVKFIKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYIPNINFRTNNGPFKFQMQKFTTKIVNMMKAERLYESQGGPIILSQIENEYGPMEYEIGAPGKAYTQWAAHMAIGLGTGVPWVMCKQDDAPDPIINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGSVPHRPAEDLAFSVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGDPTVTRLGNYQEAHVFKYKAGGCAAFLANYDSRSYATVAFGNSHYNLPPWSISILPDCKHTVYNTARVGSQSAQMKMTRIPIHGGLSWSAFNEETTSTDDSSFTLTGLLEQLNITRDLSDYLWYSTDVVINSNEGFLRNEKSPVLTVLSAGHALHVFVNGQLSGTAYGSLEFPKVTFSESVNLRVGVNKISLLSVAVGLPNVGPHFERWNAGVLGPITLNGLNDGRRDLTWQKWSYKVGLKGEALSLHSLSGSSSVDWLQGFLVSQRHPLTWYKTTFDAPIGIAPLALDMGSMGKGQVWINGQNIGRYWPAYKASGSCEYCNYAGTYDEKKCKSNCGEASQRWYHVPHSMLKPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLVSYQMQSSGKVSKPVRPKAHLSCGIGQKISSIKFASFGTPIGSCGNYHEGSCHAHNSYDAFQRNCVGKSLCTVTVSPEIFGGDPCPNVMKKLSVEAICT 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1095 843 PANTHER BETA-GALACTOSIDASE RELATED 8 837 IPR001944 GO:0004553|GO:0005975
Lal20g1095 843 Pfam Beta-sandwich domain in beta galactosidase 349 420 IPR041392 -
Lal20g1095 843 SUPERFAMILY Galactose-binding domain-like 584 752 IPR008979 -
Lal20g1095 843 Gene3D - 612 734 - -
Lal20g1095 843 PANTHER BETA-GALACTOSIDASE 8 837 - -
Lal20g1095 843 ProSiteProfiles SUEL-type lectin domain profile. 757 843 IPR000922 GO:0030246
Lal20g1095 843 Gene3D - 755 843 IPR043159 -
Lal20g1095 843 SUPERFAMILY (Trans)glycosidases 29 346 IPR017853 -
Lal20g1095 843 Pfam Galactose binding lectin domain 765 842 IPR000922 GO:0030246
Lal20g1095 843 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Lal20g1095 843 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Lal20g1095 843 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Lal20g1095 843 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Lal20g1095 843 PRINTS Glycosyl hydrolase family 35 signature 252 267 IPR001944 GO:0004553|GO:0005975
Lal20g1095 843 PRINTS Glycosyl hydrolase family 35 signature 289 304 IPR001944 GO:0004553|GO:0005975
Lal20g1095 843 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Lal20g1095 843 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Lal20g1095 843 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Lal20g1095 843 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Lal20g1095 843 SUPERFAMILY Galactose-binding domain-like 404 575 IPR008979 -
Lal20g1095 843 Pfam Glycosyl hydrolases family 35 37 341 IPR031330 -
Lal20g1095 843 Gene3D Glycosidases 26 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1095 Lal-Chr20 15098614 15106608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1095 9 843 Glycoside Hydrolase AT3G13750 78.308 0.0 1407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1095 - - gmx:100785688 1586.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1095 20 15098614 15106608 Lal20g1095 20 15098614 15106608 ECH
Lal20g1095 20 15098614 15106608 Lal18g0148 18 1171197 1177848 LSH
Lal25g0324 25 2215477 2222528 Lal20g1095 20 15098614 15106608 PCT
Lal8g0281 8 1888794 1895323 Lal20g1095 20 15098614 15106608 PCT
Lal20g1095 20 15098614 15106608 Lal25g0324 25 2215477 2222528 PCT
Lal20g1095 20 15098614 15106608 Lal8g0281 8 1888794 1895323 PCT