Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0324 ATGGTGATTATGGCCTTCAAACTCATAAAAATGTGGAATGTGAAAGTGGTGTTGTTGCTACTAGCATTTTCACTTATTGATTTTGCTAAAGCTTCTGTGTCATATGATTCCAAAGCTATCACCATTAATGGCCAAAGAAGGATCCTCATTTCTGGATCCATTCATTACCCCAGAAGTACTCCTGAGATGTGGCCAGATCTTATTCAGAAGGCTAAGGAAGGAGGCTTGGATGTGATTCAGACTTATGTATTCTGGAATGGGCATGAACCTGAACCTGGCAAATATTATTTTGAGGGTAACTATGATCTGGTGAAGTTCATAAAGTTAGTACAACAAGCAGGCCTTTATGTTAATCTCAGGATTGGTCCTTATGTCTGTGCTGAATGGAATTTTGGGGGTTTCCCTGTTTGGCTGAAGTACATTCCAGGTATCAGCTTCAGAACAGACAATGACCCTTTTAAGTTTCAAATGCAAAAATTTACCGAGAAGATTGTTAACATGATGAAAGCAGAAAGGTTATATGAGTCTCAAGGAGGTCCAATAATTCTATCCCAGATTGAAAATGAATATGGACCTATGGAGTATGAAATTGGTGCTCCGGGTAACTCTTACACTAAGTGGTCATCGGAAATGGCTCTAGGACTTGATACCGGGGTTCCATGGATAATGTGTAAGCAAGATGATGCTCCTGATCCTATTATTAACACTTGCAATGGCTTCTATTGTGATTATTTCACTCCAAATTCAGCTCACAAGCCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACGAAGTTTGGAGGTCCAGTTCCTTATCGACCTGCTGAAGACTTGGCATTCTCGGTTGCAAGGTTTATACAGAAAGGGGGATCATTTGTCAATTATTACATGTATCATGGGGGGACAAATTTTGGTCGCACTGCTGGTGGGCCCTTTATTGCTACAAGCTATGATTATGATGCACCTCTGGATGAATATGGACTACTCAGGCAACCAAAGTGGGGCCATTTGAAAGATTTACACAGAGCAGTAAAACTCTGTGAACCTGCTTTAGTAGCGGCAGATCCCACAATAACACAGATCGGAGACTATCAAGAGGCTCATGTCTTCGAATCAAAGTCGGGAGCTTGTGCTGCATTCCTTGCAAACTATAACCCAAAATCTTATGCAAAGGTAGCATTTGGAAATATGCATTACAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGACTGCAATCACACCGTTTACAACACCGCACGGAAATTTTTAGTGGCAGATTTCAGCCAAAATAAAAATTGCAAAATCTCTGTACAGATTGGTTCTCAGAGTGCACGGATGAAGATGACTCGTGACCCTATTCATGGAGGACTCTTTTGGCAAGAATTCAATGAAGAAACAGCTTCTACCGATGATAGTACCTTCACTATGACTGGCCTGTTGGAGCAGTTAAATACAACAAGAGATTCATCTGACTACTTGTGGTACTCCACCGATGTCGTGATTGATCCAAAAGAAGGATTTTTGTGGAAAGGAAAGGACCCTATTCTCACAGTACTATCTGCTGGGCATGCTTTGCATGTTTTTGTCAACGGTCAGCTATCAGGATCTATATACGGAAGCTTAGAATTCCCGAAACTAACATTTAGCGAGGCTGTGAATCTCAGAGCTGGTGTTAACAAAATCTCTCTACTAAGTGTTGCAGTTGGGCTCCCGAATGTTGGTCCACATTTTGAAACATGGAATGCTGGTGTTCTTGGTCCAATTTCATTAAATGGCCTCGACGAGGGGAGAAGGGACTTGTCTTGGCAGAAATGGTCTTACAAGGTTGGTCTGAAAGGTGAAACCTTGAGTCTACATTCTCTTAGTGGAACTTCCACAGTCGAGTGGATTCAAGGATCTTTAATTTCTCGAAAGAAGCCATTGACTTGGTACAAAACTAATTTTGATGCCCCTGCTGGAGTTGCACCATTTGCTTTAGACATGGGCAGCATGGGCAAAGGTCAAGTGTGGCTAAATGGAAAAAGTCTCGGCCGCTACTGGCCTGCTTATAAAGTATCTGGTACCTGTGATTATTGCAGCTATGCTGGAACTTATACCGAGACTAAATGCAGAAGTAATTGCGGCGAGGCTTCACAAAGATGGTATCATGTTCCCCATTCATGGCTGATGCCAACTGGAAATTTATTGGTTGTGTTTGAAGAATTAGGCGGCGATCCAAACGGGATCTTTTTGGTTAGAAGGGATATAGATAGTGTATGTGCTGATATCTATGAATGGCAGCCAAATCTTAGAAGTTATGAGATGCAAGTTTCTGGCAAAGTTAGAAAACCTGTGAGACCGAAAGCGCATTTAGCATGTGGACCTGGGCAGAAAATCTCATCAATCAAATTTGCTAGCTTTGGCACTCCATTAGGATCTTGTGGAAACTTCCTTCAAGGTGGATGTCATGCTCACAAATCATATGATGCCTTTGAAAGGAATTGTGTTGGACAGAACTGGTGCACAGTAACATTGTCACCTGAAAATTTTGGAGGAGATCCATGTCCAGATGTCATGAAGAAACTTGCAGTGGAAGCTATTTGTACCTGA 2595 0.4197 MVIMAFKLIKMWNVKVVLLLLAFSLIDFAKASVSYDSKAITINGQRRILISGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPEPGKYYFEGNYDLVKFIKLVQQAGLYVNLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNDPFKFQMQKFTEKIVNMMKAERLYESQGGPIILSQIENEYGPMEYEIGAPGNSYTKWSSEMALGLDTGVPWIMCKQDDAPDPIINTCNGFYCDYFTPNSAHKPKMWTEAWTGWFTKFGGPVPYRPAEDLAFSVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAVKLCEPALVAADPTITQIGDYQEAHVFESKSGACAAFLANYNPKSYAKVAFGNMHYNLPPWSISILPDCNHTVYNTARKFLVADFSQNKNCKISVQIGSQSARMKMTRDPIHGGLFWQEFNEETASTDDSTFTMTGLLEQLNTTRDSSDYLWYSTDVVIDPKEGFLWKGKDPILTVLSAGHALHVFVNGQLSGSIYGSLEFPKLTFSEAVNLRAGVNKISLLSVAVGLPNVGPHFETWNAGVLGPISLNGLDEGRRDLSWQKWSYKVGLKGETLSLHSLSGTSTVEWIQGSLISRKKPLTWYKTNFDAPAGVAPFALDMGSMGKGQVWLNGKSLGRYWPAYKVSGTCDYCSYAGTYTETKCRSNCGEASQRWYHVPHSWLMPTGNLLVVFEELGGDPNGIFLVRRDIDSVCADIYEWQPNLRSYEMQVSGKVRKPVRPKAHLACGPGQKISSIKFASFGTPLGSCGNFLQGGCHAHKSYDAFERNCVGQNWCTVTLSPENFGGDPCPDVMKKLAVEAICT 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0324 864 PANTHER BETA-GALACTOSIDASE RELATED 11 858 IPR001944 GO:0004553|GO:0005975
Lal25g0324 864 Gene3D - 780 864 IPR043159 -
Lal25g0324 864 Pfam Beta-sandwich domain in beta galactosidase 352 422 IPR041392 -
Lal25g0324 864 SUPERFAMILY Galactose-binding domain-like 459 596 IPR008979 -
Lal25g0324 864 Pfam Galactose binding lectin domain 786 863 IPR000922 GO:0030246
Lal25g0324 864 Gene3D Glycosidases 27 348 - -
Lal25g0324 864 SUPERFAMILY Galactose-binding domain-like 605 766 IPR008979 -
Lal25g0324 864 SUPERFAMILY (Trans)glycosidases 33 349 IPR017853 -
Lal25g0324 864 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 178 190 IPR019801 GO:0004553|GO:0005975
Lal25g0324 864 ProSiteProfiles SUEL-type lectin domain profile. 778 864 IPR000922 GO:0030246
Lal25g0324 864 Pfam Glycosyl hydrolases family 35 40 344 IPR031330 -
Lal25g0324 864 PANTHER BETA-GALACTOSIDASE 11 858 - -
Lal25g0324 864 PRINTS Glycosyl hydrolase family 35 signature 43 60 IPR001944 GO:0004553|GO:0005975
Lal25g0324 864 PRINTS Glycosyl hydrolase family 35 signature 64 82 IPR001944 GO:0004553|GO:0005975
Lal25g0324 864 PRINTS Glycosyl hydrolase family 35 signature 119 138 IPR001944 GO:0004553|GO:0005975
Lal25g0324 864 PRINTS Glycosyl hydrolase family 35 signature 176 191 IPR001944 GO:0004553|GO:0005975
Lal25g0324 864 PRINTS Glycosyl hydrolase family 35 signature 255 270 IPR001944 GO:0004553|GO:0005975
Lal25g0324 864 PRINTS Glycosyl hydrolase family 35 signature 292 307 IPR001944 GO:0004553|GO:0005975
Lal25g0324 864 PRINTS Glycosyl hydrolase family 35 signature 312 328 IPR001944 GO:0004553|GO:0005975
Lal25g0324 864 PRINTS Glycosyl hydrolase family 35 signature 641 655 IPR001944 GO:0004553|GO:0005975
Lal25g0324 864 PRINTS Glycosyl hydrolase family 35 signature 668 684 IPR001944 GO:0004553|GO:0005975
Lal25g0324 864 Gene3D - 620 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0324 Lal-Chr25 2215477 2222528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0324 17 864 Glycoside Hydrolase AT3G13750 77.358 0.0 1400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0324 - - gmx:100811187 1565.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0324 25 2215477 2222528 Lal25g0324 25 2215477 2222528 ECH
Lal25g0324 25 2215477 2222528 Lal8g0281 8 1888794 1895323 LSH
Lal25g0324 25 2215477 2222528 Lal20g1095 20 15098614 15106608 PCT
Lal25g0324 25 2215477 2222528 Lal18g0148 18 1171197 1177848 PCT
Lal20g1095 20 15098614 15106608 Lal25g0324 25 2215477 2222528 PCT
Lal18g0148 18 1171197 1177848 Lal25g0324 25 2215477 2222528 PCT