Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0148 ATGTTCATGTGCTTTTTGAAGAAGCTCATAATGTGGAGGAATGTGGTACTTGTTATGGTGATGCTATCGTTTTCACTCATTGGTCATGCTTCTGCATCTGTCTCTTATGACCATAATGCTATTTCCATCAATGGACAAAGAAAGATACTGCTTTCTGGATCCATTCATTACCCTAGAAGCACCCCTCAGATGTGGCCAGATCTTATTCAGAAGGCCAAGGAAGGAGGTTTGGATGTGATTGAGACTTATGTTTTCTGGAATGGGCATGAACCTTCACCTGGCAAATATTATTTTAAGGGGAACTATGATCTTGTGAAGTTCATAAAGCTGGTGCAGCAAGCAGGCCTCTATGTTCACCTTAGGATTGGTCCTTATATATGTGCTGAGTGGAAATTTGGTGGTTTCCCTGTTTGGCTCAAGTACATTCCAGGTATCAGCTTCAGAACAAACAATGAACCATTTAAGTTTCAAATGCAAAAATTTACGACGAAGATTGTGAATATGATGAAAGCAGAAAAGTTGTATGAGTCTCAGGGTGGTCCAATAATTCTTTCCCAGATTGAAAATGAATATGGACTTAGGGATGGTACTCCTGGTAAAGCCTACACTCAGTGGGCAGCACAAATGGCTATAGGACTTGGTACCGGCGTTCCGTGGGTCATGTGCAAGCAAGATGATGCTCCTGATCCTATTATTAACACTTGTAATGGCTTCTATTGTGATTATTTCTCTCCAAATAAGGCTTACAAACCAAAGATGTGGACAGAAGCTTGGACTGGCTGGTTTACCGAGTTTGGAGGACCAGTTCCTCACAGGCCTGCTGAGGACATGGCATTTGCAGTTGCAAGGTTTATACAGAATGGGGGATCATTTGTCAATTATTATATGTATCACGGGGGAACAAATTTCGGTCGAACCGCTGGTGGTCCTTTTATTGCTACAAGCTATGATTATGATGCACCTCTTGATGAATATGGACTGCTCAGGCAGCCAAAGTGGGGTCATCTGAAGGATTTACACAGAGCCATAAAACTCTGTGAACCCGCTTTAGTATCCGGAGATCCTAATGTAACACGGCTCGGACGCTATCAAGAGGCTCATGTCTTCGCATATAAGGCTGGAGGTTGTGCTGCATTCCTTGCAAACTATAACCCACGATCGTATGCATCGGTGGTATTTGGAAATTTGCATTATAACTTGCCTCCTTGGTCTATAAGCATTCTTCCTGACTGCAAGAACACTGTTTATAACACTGCAAGGGTTGGTTCCCAGAGCGCACAGATGAAGATGACTCGTGTTCCTATTCATGGAGGACTCTCTTGGAGTGCATTCAATGAAGAGGTAACCTCTACCGATGATAGTTCTTTCACAGTGACTGGCCTGTTGGAGCAGTTAAACATAACAAGAGATTTATCGGACTACTTGTGGTACTCCACAGATGTTGTGATCAATTCCAACGAAAGATTTTTGAGGAACGGAAAGAGTCCCGTCCTTACAATATCATCTGCTGGGCATGCTTTGCATGTTTTTGTAAATGGCAAGCTGTCAGGAACTGCATATGGAAGCTTAAAATCCCCTAAACTAACCTTTACTCAGAGTGTGAATCTTAGAGCCGGTGTTAACAAAATCTCTCTTCTAAGTGTTGCAGTTGGTCTCCCGAATGTTGGTCCACATTTTGAAAGATTGAATGCTGGTGTTCTTGGCCCAATCACATTAAATGGTCTCAATGAGGGGAGAAGGGACTTAAAATGGCAGAAGTGGTCTTACAAGGTTGGTCTTAAAGGTGAAGCTATGCGTCTTCGTTCTAGTGGAAGTTCCTCTGTTGAGTGGCTTCAGGGTTTTTCAGTTTCCAGAAAGCAGCCCTTGACTTGGTACAAAACTACTTTTGATGCCCCTGCCGGAGTTGCGCCATTGGCTTTAGACATGGGTAGCATGGGCAAAGGTCAAGTGTGGATAAACGGACAAAATCTAGGCCGCTATTGGCCTGCTTATACAGCATCTGGTTCTTGTGAATACTGTAACTATGCAGGAACATATAATGATGACAAATGCGCAAGCAACTGCGGCGAGGCTTCTCAAAGATGGTACCATGTTCCTCATTCCTGGCTGAAGCGAAGTGGAAATTTATTGGTTGTGCTTGAAGAATTGGGTGGAAACCCCAATGGGATCTATTTGGTTAGAAGGAGTATAGATAGTGTATGTGCTGATATTTATGAATGGCAACCAAATCTTGTAAGCTATGAGATGCAAGCTTCAGGCAAAATTAACAAACCTTTGAGTCCAAAAGCACATTTGTCATGTGATCATGGACAGAAAATCTCATCAATCAAATTTGCTAGCTTTGGCACTCCTGTAGGGTCTTGTGGAAACTACCATGAAGGAAACTGTCATGCTCACAAATCATATGATGCCTTTCAAAAGAACTGTGTTGGGCAAAGCTGGTGCACAGTGACAGTGTCACCAGAAATATTTGGAGGAGATCCATGTCCCAATGTAACAAAGAAACTCTCAGTGGAGGCCATTTGCACATGA 2532 0.4289 MFMCFLKKLIMWRNVVLVMVMLSFSLIGHASASVSYDHNAISINGQRKILLSGSIHYPRSTPQMWPDLIQKAKEGGLDVIETYVFWNGHEPSPGKYYFKGNYDLVKFIKLVQQAGLYVHLRIGPYICAEWKFGGFPVWLKYIPGISFRTNNEPFKFQMQKFTTKIVNMMKAEKLYESQGGPIILSQIENEYGLRDGTPGKAYTQWAAQMAIGLGTGVPWVMCKQDDAPDPIINTCNGFYCDYFSPNKAYKPKMWTEAWTGWFTEFGGPVPHRPAEDMAFAVARFIQNGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHRAIKLCEPALVSGDPNVTRLGRYQEAHVFAYKAGGCAAFLANYNPRSYASVVFGNLHYNLPPWSISILPDCKNTVYNTARVGSQSAQMKMTRVPIHGGLSWSAFNEEVTSTDDSSFTVTGLLEQLNITRDLSDYLWYSTDVVINSNERFLRNGKSPVLTISSAGHALHVFVNGKLSGTAYGSLKSPKLTFTQSVNLRAGVNKISLLSVAVGLPNVGPHFERLNAGVLGPITLNGLNEGRRDLKWQKWSYKVGLKGEAMRLRSSGSSSVEWLQGFSVSRKQPLTWYKTTFDAPAGVAPLALDMGSMGKGQVWINGQNLGRYWPAYTASGSCEYCNYAGTYNDDKCASNCGEASQRWYHVPHSWLKRSGNLLVVLEELGGNPNGIYLVRRSIDSVCADIYEWQPNLVSYEMQASGKINKPLSPKAHLSCDHGQKISSIKFASFGTPVGSCGNYHEGNCHAHKSYDAFQKNCVGQSWCTVTVSPEIFGGDPCPNVTKKLSVEAICT 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0148 843 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 179 191 IPR019801 GO:0004553|GO:0005975
Lal18g0148 843 SUPERFAMILY (Trans)glycosidases 33 347 IPR017853 -
Lal18g0148 843 Gene3D - 759 843 IPR043159 -
Lal18g0148 843 Pfam Beta-sandwich domain in beta galactosidase 350 421 IPR041392 -
Lal18g0148 843 Gene3D - 448 586 - -
Lal18g0148 843 ProSiteProfiles SUEL-type lectin domain profile. 757 843 IPR000922 GO:0030246
Lal18g0148 843 Gene3D - 587 734 - -
Lal18g0148 843 SUPERFAMILY Galactose-binding domain-like 405 576 IPR008979 -
Lal18g0148 843 Gene3D Glycosidases 30 347 - -
Lal18g0148 843 PANTHER BETA-GALACTOSIDASE RELATED 12 836 IPR001944 GO:0004553|GO:0005975
Lal18g0148 843 Pfam Glycosyl hydrolases family 35 41 342 IPR031330 -
Lal18g0148 843 PANTHER BETA-GALACTOSIDASE 12 836 - -
Lal18g0148 843 PRINTS Glycosyl hydrolase family 35 signature 44 61 IPR001944 GO:0004553|GO:0005975
Lal18g0148 843 PRINTS Glycosyl hydrolase family 35 signature 65 83 IPR001944 GO:0004553|GO:0005975
Lal18g0148 843 PRINTS Glycosyl hydrolase family 35 signature 120 139 IPR001944 GO:0004553|GO:0005975
Lal18g0148 843 PRINTS Glycosyl hydrolase family 35 signature 177 192 IPR001944 GO:0004553|GO:0005975
Lal18g0148 843 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Lal18g0148 843 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Lal18g0148 843 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Lal18g0148 843 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Lal18g0148 843 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Lal18g0148 843 Pfam Galactose binding lectin domain 765 842 IPR000922 GO:0030246
Lal18g0148 843 SUPERFAMILY Galactose-binding domain-like 585 747 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0148 Lal-Chr18 1171197 1177848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0148 13 843 Glycoside Hydrolase AT3G13750 76.758 0.0 1377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0148 - - gmx:100785688 1533.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0148 18 1171197 1177848 Lal18g0148 18 1171197 1177848 ECH
Lal20g1095 20 15098614 15106608 Lal18g0148 18 1171197 1177848 LSH
Lal25g0324 25 2215477 2222528 Lal18g0148 18 1171197 1177848 PCT
Lal8g0281 8 1888794 1895323 Lal18g0148 18 1171197 1177848 PCT
Lal18g0148 18 1171197 1177848 Lal25g0324 25 2215477 2222528 PCT
Lal18g0148 18 1171197 1177848 Lal8g0281 8 1888794 1895323 PCT