Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0218 ATGTGGCGAAGACTCTTCTCTTCTAATCTCAAATCTCTATCCACCACTACTTCTCATCATCGATCCGTTTCCGCCGCCTCCCGATTCGTCGACACCGCCACTCCTCCGTCCTCATCCTCTTTCGCCAACCGCTTCATCACCACACAATCAGGTGGTTCGATCAAGAAGAGGGTTGAAGATGTATTGCCAATTGCTACTGGTCATGAGCGAGAGGAGATTCAGGCTGAGCTTCAGGGAAGGAATATTCTTGAAATAGACCACCCCGAAGGTCCTTTTGGCACAAAGGAAGCACCTGCTGTTGTTAGGTCTTACTATGATAGAAGGATAGTTGGATGCCCAGGAGGTGAAGGCGAGGATGAACATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCTCATGAATGTCCAGTGTGTACACAGTATTTTGAGCTTGAAGTGGTAGGACCTGGTGGTGATCCTTATGAACATGGCGACCATGATCACCATTGA 492 0.4858 MWRRLFSSNLKSLSTTTSHHRSVSAASRFVDTATPPSSSSFANRFITTQSGGSIKKRVEDVLPIATGHEREEIQAELQGRNILEIDHPEGPFGTKEAPAVVRSYYDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYFELEVVGPGGDPYEHGDHDHH 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0218 163 Gene3D Cytochrome c oxidase, subunit Vb 54 148 IPR036972 GO:0005740|GO:0005751|GO:0006123
Lal8g0218 163 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 53 152 IPR002124 GO:0005740|GO:0005751|GO:0006123
Lal8g0218 163 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B 1 163 - -
Lal8g0218 163 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 163 IPR002124 GO:0005740|GO:0005751|GO:0006123
Lal8g0218 163 SUPERFAMILY Rubredoxin-like 54 151 - -
Lal8g0218 163 CDD Cyt_c_Oxidase_Vb 55 150 IPR002124 GO:0005740|GO:0005751|GO:0006123
Lal8g0218 163 Pfam Cytochrome c oxidase subunit Vb 64 155 IPR002124 GO:0005740|GO:0005751|GO:0006123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0218 Lal-Chr8 1454175 1457657 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0218 K02265 - gmx:100780886 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0199 18 1653875 1656783 Lal8g0218 8 1454175 1457657 ECH
Lal8g0218 8 1454175 1457657 Lal8g0218 8 1454175 1457657 ECH
Lal25g0265 25 1808678 1811742 Lal8g0218 8 1454175 1457657 LSH
Lal10g1163 10 18267776 18270951 Lal8g0218 8 1454175 1457657 LSH
Lal8g0218 8 1454175 1457657 Lal18g0199 18 1653875 1656783 PCT
Lal18g0199 18 1653875 1656783 Lal8g0218 8 1454175 1457657 PCT