Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0265 ATGTGGCGTAGACTTTTCTCTTCTAACCTCAAAACCCTAAACACCACTTCTCATCTCCGATCTGCTCCCTCCGCCGCCGCCACCTTCCGATTCTCTCCCACCGCCACCGCCACCGCTCCTCCCTCATCTCTATATCGCTTCCTCTCCACCCAATCAGATGGTTCGATCAAGAAGAGTGTTGAAGATGTATTGCCAATTGCTACTGGTCATGAGCGTGAGGAGTTTCAGGCTCAGCTTGAGGGAAGGGATATTCTTGAAATAGACCACCCCGAAGGTCCTTTTGGAACAAAGGAAGCACCTGCTATCGTTAAGTCTTACTATGATAGAAGGATAGTTGGATGCCCAGGAGGTGAAGACGAGGATGAACATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCTCATGAATGTCCAGTGTGCACACAGTATTTTGAGCTTGAAGTGGTAGGACCTGGCGGTGACCCTTATGGACATGGCGACCACGACGAACACCATTGA 501 0.501 MWRRLFSSNLKTLNTTSHLRSAPSAAATFRFSPTATATAPPSSLYRFLSTQSDGSIKKSVEDVLPIATGHEREEFQAQLEGRDILEIDHPEGPFGTKEAPAIVKSYYDRRIVGCPGGEDEDEHDVVWFWLEKGKPHECPVCTQYFELEVVGPGGDPYGHGDHDEHH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0265 166 Gene3D Cytochrome c oxidase, subunit Vb 56 150 IPR036972 GO:0005740|GO:0005751|GO:0006123
Lal25g0265 166 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B 1 165 - -
Lal25g0265 166 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 55 154 IPR002124 GO:0005740|GO:0005751|GO:0006123
Lal25g0265 166 Pfam Cytochrome c oxidase subunit Vb 66 155 IPR002124 GO:0005740|GO:0005751|GO:0006123
Lal25g0265 166 CDD Cyt_c_Oxidase_Vb 57 152 IPR002124 GO:0005740|GO:0005751|GO:0006123
Lal25g0265 166 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 165 IPR002124 GO:0005740|GO:0005751|GO:0006123
Lal25g0265 166 SUPERFAMILY Rubredoxin-like 56 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0265 Lal-Chr25 1808678 1811742 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0265 K02265 - qsu:112027092 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1163 10 18267776 18270951 Lal25g0265 25 1808678 1811742 ECH
Lal25g0265 25 1808678 1811742 Lal25g0265 25 1808678 1811742 ECH
Lal25g0265 25 1808678 1811742 Lal10g1163 10 18267776 18270951 LSH
Lal25g0265 25 1808678 1811742 Lal8g0218 8 1454175 1457657 LSH
Lal25g0265 25 1808678 1811742 Lal18g0199 18 1653875 1656783 PCT
Lal18g0199 18 1653875 1656783 Lal25g0265 25 1808678 1811742 PCT