Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0202 ATGTCTGCTGCGGTGTGTGGAAGCAAGAGATCTTTATTCGAAGACCTTCCTCCTTCACCTCCACTTTCCTCAAAGAGGCTTCGTTGTTCTTCCTCTTCTCCAATTCGTGTTTCTCTCCACGCTACTCTTCTTGATCACCTTCGATCTCTTTTTCCTCATATGGATGATCAGATTCTTGAGAAAGCGCTTCAACAATGTGGCAATGATTTAGATGCTGCGATTAAGAGCCTGCACGGTCTCTGCTTGGATAATAATAATGGTAATTCTGAAAATGTTCATCAACCTGACCCTAATGTCAACGCAGGTGTGTTGGAAGATAATGGGGATGTTTCTGCTCCTGTGAATCATTCAGATTCAAACAATCTTCCTGCCAATGGAGCAGAATGGATTGATTTGTTCGTTACAGAAATGACTTGTGCTACTAGTGTTGATGATGCCAGAGCCCGTGCTGCTAGGCTGCTAGAAGTTCTTGAGAAATCGATCAGTGCACATGCAAGTTCTGAGGCAACAAGTGCTCTTCAAAAGGCAAATTTGATGCTTAAGGAGCAAATTGAAGTGTTGACCAAGGAGAAAAATTGTTTTAAAAGTGCTTTTAGAATCCAGCTCGAACGTCTGTCTGATTATGAGAGCAAAAACCAAGAGTTGCAGCAGCTGAAGCAAATGGTGTCTCAATACCAGGAGCAGATCACAAATCTTGAGGTGAATAACTATGCTCTGCGAATGCATTTGAATCAGGCACAACAGTACAACCCTTTTCCTGGGCGTTTCCCCCCTGATGCCTTCTAA 786 0.4313 MSAAVCGSKRSLFEDLPPSPPLSSKRLRCSSSSPIRVSLHATLLDHLRSLFPHMDDQILEKALQQCGNDLDAAIKSLHGLCLDNNNGNSENVHQPDPNVNAGVLEDNGDVSAPVNHSDSNNLPANGAEWIDLFVTEMTCATSVDDARARAARLLEVLEKSISAHASSEATSALQKANLMLKEQIEVLTKEKNCFKSAFRIQLERLSDYESKNQELQQLKQMVSQYQEQITNLEVNNYALRMHLNQAQQYNPFPGRFPPDAF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0202 261 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 261 - -
Lal8g0202 261 CDD CUE 43 77 - -
Lal8g0202 261 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 261 - -
Lal8g0202 261 SUPERFAMILY UBA-like 34 86 IPR009060 GO:0005515
Lal8g0202 261 Gene3D - 38 89 - -
Lal8g0202 261 ProSiteProfiles CUE domain profile. 39 82 IPR003892 GO:0043130
Lal8g0202 261 Coils Coil 208 235 - -
Lal8g0202 261 Pfam CUE domain 44 76 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0202 Lal-Chr8 1357872 1360608 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0202 - - gmx:100815998 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0202 8 1357872 1360608 Lal8g0202 8 1357872 1360608 ECH
Lal8g0202 8 1357872 1360608 Lal20g1222 20 16706225 16711680 PCT
Lal8g0202 8 1357872 1360608 Lal1g1248 1 13756937 13762599 PCT
Lal8g0202 8 1357872 1360608 Lal18g0212 18 1755204 1759873 PCT
Lal20g1222 20 16706225 16711680 Lal8g0202 8 1357872 1360608 PCT
Lal1g1248 1 13756937 13762599 Lal8g0202 8 1357872 1360608 PCT
Lal18g0212 18 1755204 1759873 Lal8g0202 8 1357872 1360608 PCT