Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0212 ATGTCTGCTGCTGTGTGCGGAAACAAGAGAGCTTTTTTAGAAGAACTTCCTCCTTCTCCACCACTCTCGAAGAGGCTTCGTTGTTCTTCATCCACTTCACCTATTCGATTCTCTCTTCATTCTCTCATCGATCACCTTCGCAATCTCTTTCCTCATATGGATCACCTCCTTTATGAGAGAGCTCTGCAAGAATCTGACTATGATCTAGATGCTGCCGTCAAGAGGCTGAATGAGCTTTGCTTGGGAACTGCAGATGAAAATTCTGGAACTGCCGAAGGATCAAATCTCAAGGTTAATGTCCATACAGCTAAATTGGAAGGTTATGGGAATGCTTCTGCTTCTGAGAATCAACCTGCTATGAATAACCTTCCCGCGAATGGAGCAGAATGGGTTGAATTTTTTGTTAGAGAAATGAGTGTTGCTACTAATGTTGACGATGCTAGAGGCCGTGCTGCTAGAATGCTGGAGGTTCTAGAGAAATCAATCAGTGCACGTGCAAGTGCTGATGCAACTGATGCACTTCACAAGGAAAATTTGATGCTGAAGCAACAAATTGAAGTGTTGATTAAGGAGAAAAATTCGTTTAAGAATGCTTTCAGAATCCAGCATGAACGCCTTTCTGATTATGAGGATAAGAACCAAGAGTTGCAGAATTTGAAGCAGTTGGTGTCTCAACACCAGGAACAGATCAGAACTCTTGAGATGAATAACTATACTTTGGGGATGCATTTGAAGCAGGCTCAGCAGAGCAACAACCCCTTTCATGGGCGTTTCCCTCCAGATGTTTTCTAA 792 0.4293 MSAAVCGNKRAFLEELPPSPPLSKRLRCSSSTSPIRFSLHSLIDHLRNLFPHMDHLLYERALQESDYDLDAAVKRLNELCLGTADENSGTAEGSNLKVNVHTAKLEGYGNASASENQPAMNNLPANGAEWVEFFVREMSVATNVDDARGRAARMLEVLEKSISARASADATDALHKENLMLKQQIEVLIKEKNSFKNAFRIQHERLSDYEDKNQELQNLKQLVSQHQEQIRTLEMNNYTLGMHLKQAQQSNNPFHGRFPPDVF 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0212 263 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 263 - -
Lal18g0212 263 Coils Coil 199 236 - -
Lal18g0212 263 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 263 - -
Lal18g0212 263 CDD CUE 40 76 - -
Lal18g0212 263 Pfam CUE domain 40 78 IPR003892 GO:0043130
Lal18g0212 263 ProSiteProfiles CUE domain profile. 38 83 IPR003892 GO:0043130
Lal18g0212 263 SUPERFAMILY UBA-like 40 83 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0212 Lal-Chr18 1755204 1759873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0212 - - lang:109347770 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0212 18 1755204 1759873 Lal18g0212 18 1755204 1759873 ECH
Lal20g1222 20 16706225 16711680 Lal18g0212 18 1755204 1759873 LSH
Lal1g1248 1 13756937 13762599 Lal18g0212 18 1755204 1759873 LSH
Lal8g0202 8 1357872 1360608 Lal18g0212 18 1755204 1759873 PCT
Lal18g0212 18 1755204 1759873 Lal8g0202 8 1357872 1360608 PCT