Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1248 ATGTCTGCTGCTGTGTGTGGAAGCAAGAGAGCTTTATTCGAAGAAATTCCTCAATCTCCTCCAATCTCCAAGAGGCTTCGTTGTTCTTCTTCAACTTCACCAATTCGAATTTCACCTCATCATCATTCTCTCATCGAACAACTTCGCAATCTTTTTCCTCATCTGGATCACCCTCTTTATGAGAGAGCTCTGCAAGAATCTGGCTATGATCTAGAGGGTGCCATCAAGAGGCTGAATGAGCTTTGCTTGGGAACTGCAGATGGAAATTCTGGAACTGCCGAAGGATCAGAGGCTGAGGTTAATGTCTATACAGCTAAATTGGAAAATGATGGGAATGCTTCTGCTTCTGAGAATCAGCCTGCTATGAACCACCTTCCTGCAAATGGAGCAGAATGGGTTGAATTTTTCGTTACAGAAATGTCTACTGCTACTAGTGTTGGCGATGCTAGAAGCCGTACTGCTAGAATGCTGGAGGTTCTAGAGAAATCTATCAGTGCACGTGCAAATGCCGATGCAATTGATCTTCTTCAAAAGGAGAACTTGATGCTGAAGCAGCAAATTGAAGTGTTGATGAAGGAGAAAAATTCTTTTAAGAATGCTTTTAGAATCCAGCTTGAGCGCTTTTCCGATTATGAGGATAAGAACCAGGAGTTGCAGCATTTGAAGCAATCGGTGACTCAATACCAGGAGCAGATCAGAACTCTTGAGATGAATAAGTATACTTTGGCAATGTATTTGGAGAGGGCTCAACAAAGCAACAACACCTTTCATGGGCATTTCCCCCCTGATGTCTTCTAA 798 0.4286 MSAAVCGSKRALFEEIPQSPPISKRLRCSSSTSPIRISPHHHSLIEQLRNLFPHLDHPLYERALQESGYDLEGAIKRLNELCLGTADGNSGTAEGSEAEVNVYTAKLENDGNASASENQPAMNHLPANGAEWVEFFVTEMSTATSVGDARSRTARMLEVLEKSISARANADAIDLLQKENLMLKQQIEVLMKEKNSFKNAFRIQLERFSDYEDKNQELQHLKQSVTQYQEQIRTLEMNKYTLAMYLERAQQSNNTFHGHFPPDVF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1248 265 CDD CUE 42 78 - -
Lal1g1248 265 ProSiteProfiles CUE domain profile. 40 85 IPR003892 GO:0043130
Lal1g1248 265 Coils Coil 211 238 - -
Lal1g1248 265 SUPERFAMILY UBA-like 41 85 IPR009060 GO:0005515
Lal1g1248 265 Coils Coil 173 193 - -
Lal1g1248 265 Pfam CUE domain 41 80 IPR003892 GO:0043130
Lal1g1248 265 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 265 - -
Lal1g1248 265 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1248 Lal-Chr1 13756937 13762599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1248 - - lang:109347770 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1248 1 13756937 13762599 Lal1g1248 1 13756937 13762599 ECH
Lal20g1222 20 16706225 16711680 Lal1g1248 1 13756937 13762599 LSH
Lal1g1248 1 13756937 13762599 Lal18g0212 18 1755204 1759873 LSH
Lal8g0202 8 1357872 1360608 Lal1g1248 1 13756937 13762599 PCT
Lal1g1248 1 13756937 13762599 Lal8g0202 8 1357872 1360608 PCT