Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal8g0106 | ATGGGTCAGGGCCTGAGTTGCAGAGCTAACCACAATGAACATGGTCTCTTCACTGCGGTCCAGCATGGTGACCTTCAAACAGTCTCATCTCTTCTTCAAACTGACCCTTCTCTCTTGCACCACACCACTCTCTATGATCGCCACTCTACTCTTCATATTGCTGCTGCCAATGGCCAGATCCAGATTCTATCAAGGCTTTTAGATGGATCTGTTAACCCAGATGTTTTAAATCGCCAAAAGCAGACTCCGCTTATGTTGGCAACAATGCACGGTAAAATCGATTGTGTGGAGAAGCTCCTTGAAGCTGGAGCTAATGTATTAATGTTTGATGCTATATATGGAAGAACCTGCTTGCACTATGCTGCATACTATGGCCATTCTTCTTGCCTTAAAGCAATTCTTTCAGCTGCTCAATATAGTCCAGTTGCTGCTTCTTGGGGATTTTCTCGGTTTGTGAATATTAGAGATGGAAGGGGCGCAACTCCGTTGCACTTGGCAGCTCGTCAAAGACGGCCTGAATGTGTACATATTCTATTAGACAGCGGAGCTCTTGTTTGTGCTTCAACTGGTGGATATGGCTTTCCTGGGAGCACTCCCCTTCATCTAGCAGCTAGAGGTGGATCTTTGGATTGCATTCGCGAATTGTTAGCATGGGGTGCAGATCGTCTTCATCGTGATGCATCAGGGAGGATACCATATGTTGTTGCTCTGAAACACAGACATGGTGCATGTGCATCATTGCTAAATCCCACATCTGCAGAGCCTCTTGTGTGGCCATCTCCGTTGAAGTTCATCAGCGAGCTTAATTCGGAAGCCAAAGCTTTATTAGAACAGGCCTTGATGGAGGCTAACAAGGAAAGGGAGAAAAACATATTAAAGGGGAGTGCTTACATTCCGTCTCCATCACATTCTGATGGGGTAGACGACGATATCTCTGAGGTATGCACAATTGAAGTCCAGAACTGTGGCCACCAGATGTGTGCCCAATGCACACTAGCCCTTTGTTGCCACAACAAGCCTAACCCTATCACCTCTTGTCTTACTCCACCTGTATGTCCATTTTGTCGAAGCGCCATAGCTAGACTAGTGGTTGTGAAGATAGAAAATCATAATGACATTGAAGCTGATCAAGATAGTGTTGATATTAATTGTTCCAAGCTAAGCAAATCAAAGAAGTCTAGAACCTTGAACGATGGCGGTAGCAACAGCTTCAAGGGGTTATCATTTGGAAAATTGGCTGGCCGCAGCTCCGGAAGGATTGCTGCTGAAAATGAGTGGGTTGACAAACAGTAA | 1293 | 0.4548 | MGQGLSCRANHNEHGLFTAVQHGDLQTVSSLLQTDPSLLHHTTLYDRHSTLHIAAANGQIQILSRLLDGSVNPDVLNRQKQTPLMLATMHGKIDCVEKLLEAGANVLMFDAIYGRTCLHYAAYYGHSSCLKAILSAAQYSPVAASWGFSRFVNIRDGRGATPLHLAARQRRPECVHILLDSGALVCASTGGYGFPGSTPLHLAARGGSLDCIRELLAWGADRLHRDASGRIPYVVALKHRHGACASLLNPTSAEPLVWPSPLKFISELNSEAKALLEQALMEANKEREKNILKGSAYIPSPSHSDGVDDDISEVCTIEVQNCGHQMCAQCTLALCCHNKPNPITSCLTPPVCPFCRSAIARLVVVKIENHNDIEADQDSVDINCSKLSKSKKSRTLNDGGSNSFKGLSFGKLAGRSSGRIAAENEWVDKQ | 430 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal8g0106 | 430 | Gene3D | - | 144 | 293 | IPR036770 | - | |
| Lal8g0106 | 430 | ProSiteProfiles | Ankyrin repeat region circular profile. | 79 | 106 | - | - | |
| Lal8g0106 | 430 | ProSiteProfiles | Ankyrin repeat region circular profile. | 195 | 221 | - | - | |
| Lal8g0106 | 430 | ProSiteProfiles | Ankyrin repeat profile. | 195 | 227 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | SMART | ANK_2a | 195 | 224 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | SMART | ANK_2a | 113 | 143 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | SMART | ANK_2a | 158 | 187 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | SMART | ANK_2a | 79 | 108 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | SMART | ANK_2a | 11 | 40 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | SMART | ANK_2a | 46 | 75 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | PANTHER | UBIQUITIN-PROTEIN LIGASE XBAT31, PUTATIVE-RELATED | 1 | 430 | - | - | |
| Lal8g0106 | 430 | ProSiteProfiles | Ankyrin repeat region circular profile. | 46 | 78 | - | - | |
| Lal8g0106 | 430 | Pfam | Ankyrin repeats (3 copies) | 113 | 184 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | Pfam | Ankyrin repeats (3 copies) | 16 | 110 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | Pfam | Ankyrin repeat | 196 | 226 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | ProSiteProfiles | Ankyrin repeat region circular profile. | 158 | 183 | - | - | |
| Lal8g0106 | 430 | ProSiteProfiles | Ankyrin repeat profile. | 46 | 78 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | SUPERFAMILY | Ankyrin repeat | 12 | 251 | IPR036770 | - | |
| Lal8g0106 | 430 | Coils | Coil | 269 | 289 | - | - | |
| Lal8g0106 | 430 | Gene3D | - | 10 | 143 | IPR036770 | - | |
| Lal8g0106 | 430 | ProSiteProfiles | Ankyrin repeat profile. | 79 | 111 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | ProSiteProfiles | Ankyrin repeat profile. | 158 | 190 | IPR002110 | GO:0005515 | |
| Lal8g0106 | 430 | PANTHER | HOMEOBOX PROTEIN WARIAI | 1 | 430 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal8g0106 | Lal-Chr8 | 753712 | 756621 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lal8g0106 | 78 | 248 | Miscellaneous Gene Families | AT5G02620 | 26.866 | 3.43e-06 | 47.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal8g0106 | - | - | gmx:100786708 | 717.227 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal8g0106 | 8 | 753712 | 756621 | Lal8g0106 | 8 | 753712 | 756621 | ECH | |
| Lal10g1262 | 10 | 18826074 | 18828818 | Lal8g0106 | 8 | 753712 | 756621 | LSH | |
| Lal8g0106 | 8 | 753712 | 756621 | Lal1g0328 | 1 | 1985636 | 1988498 | PCT | |
| Lal8g0106 | 8 | 753712 | 756621 | Lal2g0232 | 2 | 1347818 | 1350789 | PCT | |
| Lal1g0328 | 1 | 1985636 | 1988498 | Lal8g0106 | 8 | 753712 | 756621 | PCT | |
| Lal2g0232 | 2 | 1347818 | 1350789 | Lal8g0106 | 8 | 753712 | 756621 | PCT |