Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0025 ATGGTAAAGAAACTTGGAGAAGATGACCCTAGAAGAGTTATTCATTCCTTTAAGGTTGGATTGGCACTTGTATTAATTTCCATTTTGCAACATCTTCGTCCAACCTTCTATGCTTTTGGTGACAATATATTGTGGGCCGTTCTTACTGTCGCTCTTGTCCTCGAATTTTCCGTAGGCGCAACACTGGGAAAAGGTTTAAACAGGATATTGGCAACGTGGTTAGCTGGTGCTCTTGGTCTTGGAACTCGCAGCATAGCCAATCTTTGTGGACAGAAAGGAGAAGCTGTATTGACTTCTATTTTTGTCTTTCTCATAGCTGGAACAGTGACATTTATGAGATTTTCCACTGGATTGAAGGCGAGATATGATTATGGGTTCATCATATTTATATTAACATTCTGCATGGTATCTCTTTCGGATGATAAAGAGACAACAATGTTAAAACTTGCCCAAGAGAGACTATTAACAATCATCATTGGGTGCTTTGTAGCTGTTATAGTATGTATTTCTATATGCCCTGTTTGGATTGGCCAGGATCTTCACAATCAGATTGTGGCCAACATGGAAATAATTGCCCACTTTTTTCAAGGATTTAGTGATGAGTACTTGAAGAAATCAGAAAATACGGAAGTTGTAGATGATAGATCATTTCTCCACCGATATAAAAGTGTTCTCTCTTCAAAAAGCAGTGAAGAAACAATGGCTGTTTTGGCAAGATGGGAACCTCGTCATGGCGGGTTCAGATTCCGACACCCATGGAAGCAATATTTAAAGATCGGTAACCTAATAAGGTTATGTGCTAACAATATCGAAGCTCTTATTGTCTGCCTCCTCCACTCTGACCAAAGGCAGTGTGAACTTGGAACCAAGATTAAAGAATCATGCACCATTATTAGCACTGAGTGTGGGAAAACCCTTAAAGAAGCATCATTGATAGTTAAACATATGACTATGTCATCAATGCCCAATTCACATATTGCAAATGCTAAAAACGCAATACAATCTATTAAATCAATACTAAGAACAAACCCTTCGGAGGGAGTAGATTACGCTGAGATGATACAAGTTTCTAAAGTTGCTTCACTACTAATTGATGTTGTGGATTGCACTCAGAATATTTGTGAAGCAATTGATGAATTAGCATCCCTTGCCAAATTTCATCACCGAGGAACAGTAGTGCAACCAGTTGATGATTCAGTTCATGTTATCGCCATTATTGACACACCTTCAATATTAGAATTAAGGAACGAGAATTAA 1257 0.3835 MVKKLGEDDPRRVIHSFKVGLALVLISILQHLRPTFYAFGDNILWAVLTVALVLEFSVGATLGKGLNRILATWLAGALGLGTRSIANLCGQKGEAVLTSIFVFLIAGTVTFMRFSTGLKARYDYGFIIFILTFCMVSLSDDKETTMLKLAQERLLTIIIGCFVAVIVCISICPVWIGQDLHNQIVANMEIIAHFFQGFSDEYLKKSENTEVVDDRSFLHRYKSVLSSKSSEETMAVLARWEPRHGGFRFRHPWKQYLKIGNLIRLCANNIEALIVCLLHSDQRQCELGTKIKESCTIISTECGKTLKEASLIVKHMTMSSMPNSHIANAKNAIQSIKSILRTNPSEGVDYAEMIQVSKVASLLIDVVDCTQNICEAIDELASLAKFHHRGTVVQPVDDSVHVIAIIDTPSILELRNEN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0025 418 Pfam Aluminium activated malate transporter 4 381 IPR020966 GO:0015743
Lal8g0025 418 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 392 - -
Lal8g0025 418 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0025 Lal-Chr8 257359 259683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0025 3 384 Miscellaneous Gene Families AT1G08440 47.273 7.76e-128 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0025 - - lang:109357894 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0071 25 489638 492519 Lal8g0025 8 257359 259683 LSH
Lal8g0025 8 257359 259683 Lal1g0446 1 2768926 2771765 PCT
Lal8g0025 8 257359 259683 Lal2g0380 2 2245793 2249728 PCT
Lal1g0446 1 2768926 2771765 Lal8g0025 8 257359 259683 PCT
Lal2g0380 2 2245793 2249728 Lal8g0025 8 257359 259683 PCT