Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0071 ATGGCATTTTCAGGTGCTGAATACACTACAGATTGTAGTTGCCCTCATACCTTGCAGTGCTTAAGAGCCTTACCTGAGAAATTATGGTGTAGGTTAGTAAAAGTCTCAAAGATTGCAATGAAATTTGGAGAAGATCACCCTAGAAGACTTATTCATTCCTTTAAGGTTGGAGTGGCACTAGTATTGATTTCAATTCTGCATCATTTTCGTCCCTCCTTCTATGCTTTTGGTGACAATATTATGTGGGCAGTTCTTACCGTTGTTGTTGTCTTAGAATTTTCTGTTGGTGCAACACTGGGAAAAGGTTTAAACAGGATGTTGGCAACGTTTTTAGCTGGTGCTCTTGGTGTTGGAGCTCATTGTCTAGCAAATCTTTCTGGAGACAAAGGAGAGGCTGTGCTCACTCCAATATTTATCTTTCTCATAGCTGGAACAGTGACATTAATGAGATTTTCCCCTAGATTCAAAGTGAGATATGATTATGGGATGATCATATTTATATTGACCTTCTGCTTGGTATCTCTTTCGGATGAGAAAGAGAGTGAAATGCTAGAAATTGCACATGAAAGATTGTTAACAATAATTATTGGAAGTTGTATAGCTGTTATGGTATGTATTTGTATATGCCCTGTTTGGGCTGGCCAGGATCTTCACAATGAGATTTCTTCCAACATCGAAAAGCTTGCCCTCTTTTTTGAAGGATTTAGTGATGAGTACTTCAACAATTCAGATACTACACAAACTGTTCAAGATAAATCGTTTCTGCATCGATATAAAAGTGTCCTCTCTTCAAAAAGTAGTGAAGAAACAATGGCTGTTTTGGCAAGATGGGAACCTTGTCATGGCAAGTTCAAATTTCACCATCCATGGAAGCAATACTTAAAGATTGGTAACCAAACACGAGTTTGTGCTTACAAAATTGAAGCTCTTAGTTCCTATCTCCTTCACTCCAAGCAAATCCCACATGAAATTCAAAGCATGATTCAAGAGTCATGCACTATTATTAGCTTAGAATGTGGTAAAACCCTAAAAGAATCATCATTGGGAGTTAGACACATGACTAAGTCATCAATGCCAAATCAACATGTTGCAAATGCTAAAAATGCGGTTGAATCTCTTAAATCAGTTCTAAGAACAAATCCATGGGAAGGAGGAGATTATGTAGATATAATAGAGGTTGCTGCAGTGGCTTCATTACTAATTGATGTTGTGGATTGCACTCAGAAAATTTGTGAAGAAATTGACGAACTAGCATCACTTGCAAGATTTGTACCTTCCCAGTTACTTCATCAGGGAACAGTTCAACCAATTTCCAAACGTGATGATTCCATTCATGTTATTACAATTGATGAGATAACTCCAAGATTATATGAATAA 1377 0.3725 MAFSGAEYTTDCSCPHTLQCLRALPEKLWCRLVKVSKIAMKFGEDHPRRLIHSFKVGVALVLISILHHFRPSFYAFGDNIMWAVLTVVVVLEFSVGATLGKGLNRMLATFLAGALGVGAHCLANLSGDKGEAVLTPIFIFLIAGTVTLMRFSPRFKVRYDYGMIIFILTFCLVSLSDEKESEMLEIAHERLLTIIIGSCIAVMVCICICPVWAGQDLHNEISSNIEKLALFFEGFSDEYFNNSDTTQTVQDKSFLHRYKSVLSSKSSEETMAVLARWEPCHGKFKFHHPWKQYLKIGNQTRVCAYKIEALSSYLLHSKQIPHEIQSMIQESCTIISLECGKTLKESSLGVRHMTKSSMPNQHVANAKNAVESLKSVLRTNPWEGGDYVDIIEVAAVASLLIDVVDCTQKICEEIDELASLARFVPSQLLHQGTVQPISKRDDSIHVITIDEITPRLYE 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0071 458 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 17 430 - -
Lal25g0071 458 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 17 430 - -
Lal25g0071 458 Pfam Aluminium activated malate transporter 41 418 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0071 Lal-Chr25 489638 492519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0071 31 449 Miscellaneous Gene Families AT1G08440 45.561 1.36e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0071 - - lang:109357894 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0071 25 489638 492519 Lal8g0025 8 257359 259683 LSH
Lal25g0071 25 489638 492519 Lal1g0446 1 2768926 2771765 PCT
Lal25g0071 25 489638 492519 Lal2g0380 2 2245793 2249728 PCT
Lal1g0446 1 2768926 2771765 Lal25g0071 25 489638 492519 PCT
Lal2g0380 2 2245793 2249728 Lal25g0071 25 489638 492519 PCT