Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0380 ATGGAGATGGCATCTTCAAACACAAACCAGGAGAAAGGAGTACTTGGAAGAGTGTGGGAACGGATAATAACCTTGACAAAATCTTTTAAGGAGAAGGTGTGGGGAATTTGTACAATGTCAAAAAAGATAGCACAAGATGACCCTAGAAAAGTTATTCATTCACTTAAAGTGGGACTTGCAATCTCACTGGTTTCTCTATTCTATTACTATCAACCACTATATGAGAATTTTGGTCTCTCTGCAATGTGGGCTGTGATGACTGTAGTGGTAGTTTTTGAGTACACTGTGGGAGCCACTCTAGGAAAAGGTTTGAATAGAACATTGGCAACCTTGATGGCTGGTTCTCTTGGTGTTGGGGCTCATTACATGGCTAGCCTAGCAGGAGAGAGAGCAGAACCCATATTGATTGGCTTGTTTGTTTTCGTACAAGCTGCAATAGTATCATTTATAAGGTTTATTCCCAAAGTGAAGGCAAGATATGATTATGGGTTCTTGATATTTATTTTGACATTCTCTTTAATATCAGTCTCTGGTTTTCGTGATGATGAAGTGCTGGAAATGGCACACCAGAGATTGTCCACCATTTTCATAGGAGGTTCTGCTTGTGTGGTGATTTCCATTTTTGTTTGTCCTGTGTGGGCCGGTGAAGAGCTCCACCATTCAATTGCACTCAACTTGGAAAAACTTGGTGATTTCTTAGAAGCATTTATATGTGAGTACTTCACAAAATTAGAGGATGGAGATTCTAAAAATATGAAATTTTGTCTGGAACGTTATAAAAGCGTCCTTAATTCCAAAAGTTCTGAAGAGTCTCAGGCCAATTTTGCCCGATGGGAACCTCGTCATGGCAAGTTCAGATTTCGTCATCCATGGGACCAATACCTTAAAATTGGTACCCTTAGCCGTGAATGTGCATATAGAATGGAAGCTCTCAAAGGATACCTCAATTCAAACAATCAAGGATCTTCAGAAATTCGATCTATGATTGAAGAGGCGAGCTTAGAAATGACTATGGAATCTACAAAAGCTTTAAAGGAACTAGGATTGTCTATAAAAACAATGACAAGGCCATTTTCTGCTGATATTCATATTGCAAACTCAAAAGCTGCAAGCAAGAGACTTAAATCATTGCTTCAATCAAGCTTAAGAAAAGAAACAGATCTTTTATCAGTGATACCAGTTGGAACAATAGCTTCATTACTAATTGATATTGCTGATTGCACAGAAAAACTAGCAGATTGTGTCAATGATCTTGCCTCCCTCTCAAATTTTGATGATGTAGAGACAAATAAATGTCCAAAAATATCACTACCTCTATACTGTGAATGTGCTGAACCGGATCCTAAGATTGATGCTTCTGATGTTGTTATTCTAGTTGAGGAGTCAGCTCTACCTATGTCAGATTGTGGAAAACCAAAATCTGATCAACATAACATAGTTTGA 1443 0.3825 MEMASSNTNQEKGVLGRVWERIITLTKSFKEKVWGICTMSKKIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTLATLMAGSLGVGAHYMASLAGERAEPILIGLFVFVQAAIVSFIRFIPKVKARYDYGFLIFILTFSLISVSGFRDDEVLEMAHQRLSTIFIGGSACVVISIFVCPVWAGEELHHSIALNLEKLGDFLEAFICEYFTKLEDGDSKNMKFCLERYKSVLNSKSSEESQANFARWEPRHGKFRFRHPWDQYLKIGTLSRECAYRMEALKGYLNSNNQGSSEIRSMIEEASLEMTMESTKALKELGLSIKTMTRPFSADIHIANSKAASKRLKSLLQSSLRKETDLLSVIPVGTIASLLIDIADCTEKLADCVNDLASLSNFDDVETNKCPKISLPLYCECAEPDPKIDASDVVILVEESALPMSDCGKPKSDQHNIV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0380 480 Pfam Aluminium activated malate transporter 42 419 IPR020966 GO:0015743
Lal2g0380 480 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 435 - -
Lal2g0380 480 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0380 Lal-Chr2 2245793 2249728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0380 31 420 Miscellaneous Gene Families AT1G08440 58.524 1.91e-171 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0380 - - aprc:113859727 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0380 2 2245793 2249728 Lal2g0380 2 2245793 2249728 ECH
Lal1g0446 1 2768926 2771765 Lal2g0380 2 2245793 2249728 LSH
Lal25g0071 25 489638 492519 Lal2g0380 2 2245793 2249728 PCT
Lal8g0025 8 257359 259683 Lal2g0380 2 2245793 2249728 PCT
Lal2g0380 2 2245793 2249728 Lal25g0071 25 489638 492519 PCT
Lal2g0380 2 2245793 2249728 Lal8g0025 8 257359 259683 PCT