Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0446 ATGGAGATGGCATCTGGAAACACAAACCAGGAGAAAGGGATAGTTGGTAGAGTATTTGAACGGCTAATGACTTTGGCAAAAGATTTTAAGGAGAAGGTGTTTGAAATTTGTAGAATGTCAAAAAAGATAGCAGAAGATGACCCTAGAAAAGTTATTCATTCACTTAAAGTTGGACTTGCAATCTCATTAGTGTCTTTATTCTACTACTATCAACCACTATATGAGAATTTTGGTCTCTCTGCAATGTGGGCTGTGATGACTGTAGTGGTAGTTTTTGAGTACACTGTTGGAGCCACTCTAGGAAAAGGTTTGAATAGAACATTGGCAACCTTGATGGCTGGTACTCTTGGTGTTGGGGCTCATTACTTGGCTAGCCTAGCAGGAGAAAAGGCAGAACCCATATTGATTGGCTTCTTTGTTTTCCTTCAAGCTGCAATAGTATCATTTATAAGGTTTTTCCCTAAAGTGAAAGCAAGATATGATTATGGATTCCTGATATTTATTTTGACATTCTCTTTGATATCTGTTTCTGGTTTTCGTGAGGATGAAGTATTGGAAATGGCACATAAGAGATTATCCACCATTTTCATAGGAGGTTCGGCTTGTGTTATGATTTCCATTTTTGTTTGTCCTGTATGGGCTGGTGAAGAGCTTCACTATTCAATTGCAATCAACTTGGAAAAACTTGGTGATTACTTAGAAGAATTTGTATGTGGGTACTTCACAACATTAGAGGAAGGAGATTCTGTGAATTTTCCTTGTCTAGAAGCTTATAAAAGCATCCTTAATTCTAAAAGCTCTGAAGAGTCTTTGGCCAATTTTGCAAAATGGGAACCTCGTCATGGCAAGTTCAAATTTCATCACCCATGGGATCAATACCTCAAAATTGGCACCCTTACTCATCAATGTGCATATCGAATGGAAGCTCTTAAAGAATACCTCAATTCAGACACCCAAGAATCTTCAGAAATTCGGTCTAGGATCAAAGGTGTGAGTTTAGAAATGACTATGGAATCTAGCAAAGCTTTGAAAGAACTAGGATTATCTATCAAAACAATGACAATGTCATCTTCTGCTGATATTCATATTGCAAACTCAAAAGCTGCAAGCAAGAGACTTAAGTCATTGCTCCAATCAAGCTTAAGGGAAGAAACAAATCTACTCTCAGTGATACCAGTTGGAACAGTAGCTTCACTACTAATTGATATTACCGATTTCACAGAGAAACTATCAGATTGTGTTAATTATCTTGCTTCCCTCACAAATTTTGATGGTGTAGAGACAAATAAATATCCAAAAATATCTCAATCTACTTACTGTGAATGTGCTGATCCGGATCCCAAGATTGAAACCTCACATGTTGTTGTTATTCTAGTTGAGGAATCAAGTCTAGCTAAGCCATGTGGAAAATCAATATCTGTTCAACATAACAATGTTTGA 1440 0.3701 MEMASGNTNQEKGIVGRVFERLMTLAKDFKEKVFEICRMSKKIAEDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTLATLMAGTLGVGAHYLASLAGEKAEPILIGFFVFLQAAIVSFIRFFPKVKARYDYGFLIFILTFSLISVSGFREDEVLEMAHKRLSTIFIGGSACVMISIFVCPVWAGEELHYSIAINLEKLGDYLEEFVCGYFTTLEEGDSVNFPCLEAYKSILNSKSSEESLANFAKWEPRHGKFKFHHPWDQYLKIGTLTHQCAYRMEALKEYLNSDTQESSEIRSRIKGVSLEMTMESSKALKELGLSIKTMTMSSSADIHIANSKAASKRLKSLLQSSLREETNLLSVIPVGTVASLLIDITDFTEKLSDCVNYLASLTNFDGVETNKYPKISQSTYCECADPDPKIETSHVVVILVEESSLAKPCGKSISVQHNNV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0446 479 Pfam Aluminium activated malate transporter 42 418 IPR020966 GO:0015743
Lal1g0446 479 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 434 - -
Lal1g0446 479 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 7 1 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0446 Lal-Chr1 2768926 2771765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0446 31 419 Miscellaneous Gene Families AT1G08440 59.033 1.41e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0446 - - aprc:113859727 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0446 1 2768926 2771765 Lal1g0446 1 2768926 2771765 ECH
Lal1g0446 1 2768926 2771765 Lal2g0380 2 2245793 2249728 LSH
Lal25g0071 25 489638 492519 Lal1g0446 1 2768926 2771765 PCT
Lal8g0025 8 257359 259683 Lal1g0446 1 2768926 2771765 PCT
Lal1g0446 1 2768926 2771765 Lal25g0071 25 489638 492519 PCT
Lal1g0446 1 2768926 2771765 Lal8g0025 8 257359 259683 PCT