Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1217 ATGTGTTCTCAAATAAGGCTTCTGGGTTGGTATTCATGGATCTACTATTTGGTATGCTTCAGCTTCATTGTAGTGAATGGTGAAAGAATAGGAGATGCAACAGAAAAAGGCTTTGTTTTCATTCATGGGAAATCTTTTATTGGAAAGATTGATGATGATTTTGTCTGTGCCACTATGGATTGGTGGCCACCTCAGAAATGTGACTATGGAAGATGCAGTTGGGGTCTTACTTCTCTTCTTAATCTGGACCTCAACAACAAAATTTTGTTAAATGCAGTAAAAGCATTTTCACCCTTGAAAATTAGATTAGGAGGAACATTGCAAGATAAGGTCACATATGGGACTGAAGATTATCACCATCCATGTACTTCTTTTGTTTGGAACACTAGTGAAATGTTTGGTTTCACTAAAGGGTGCTTACCCTTGCATAGATGGGATGAGCTAAACAGCTTTTTCAAAAAAGCAGGGGCTAAGATTATATTTGGATTAAATGCTCTTGCTGGAAAGTCTATAAAGTCTGGTTATGCAGTTGGGCCTTGGGACCATTCCAATGCAGAATCTTTTATACGTTACACTGTAAAAAAGAACTACACCATTCATGGTTGGGAACTTGGCAATGAATTGTGTGGGAATGGAATTGGAACAAGTGTTTCTGCAAATCAATATGTTTCCGATGTTGCTTCGTTACGATTTATCATTCAAAATGCATACAGAGGGATTGAGCCTAAGCCATTACTTATTTCACCTGGAGGCTTTTTTGATGCAACTTGGTTCAAAGAATTTGTAACCAAAGCGGGTAAATCTGTGGATGTGGTAACTCACCACATTTATAACCTTGGTCCAGGAGTTGATGAACATATAACTGAAAAAATTCTCGATCCTTCATATCTTGATGTAGAGGCTAGCACATTCAACAGCCTCAAAAACATACTTCGAAGTTCGGCAACCTCAGCAACAGCATGGGTTGGTGAGGCAGGAGGGGCTTACAATAGTGGCCATCATCTTGTGTCTGATGCATTTGTCTACAGCTTCTGGTATTTGGATCAGCTTGGCATGTCAGCCACCTATGACACCAGAACCTACTGCAGACAAACTTTGATTGGAGGAAACTATGGTTTATTGAATACTAGTACTTTCATACCAAATCCAGATTACTATAGTGCTCTTCTATGGCATCGACTCATGGGACAACGAGTCCTATCAACTAGCTTCTATGGGACAAAGAAGATCAGAACTTATGCACACTGTGCAAAGAAATCTCAAGGAATCACAATACTATTACTCAACTTGGGCAATAGCACCACTGTTGAAGCCAAAGTGGCCTTGAGATTTGCTAAGGAACCTTATGGTCGTGTAAAATTCAGAGAAGAGTACCATTTAACAACACAGAGTCAAAACTTACATAGCCAAGTCATGTTACTAAATGGTAACATTTTAAGTGTAAACAAAGATGGTGATATTCCTCCTTTGAAGCCTCTATATGTAGACCCATCAAAGCCAATAGTTGTTGGTCCTTTTTCTGTTGTATTTGCACATATACCAGATATTATTCTTCCAGCTTGCACCTAG 1569 0.3907 MCSQIRLLGWYSWIYYLVCFSFIVVNGERIGDATEKGFVFIHGKSFIGKIDDDFVCATMDWWPPQKCDYGRCSWGLTSLLNLDLNNKILLNAVKAFSPLKIRLGGTLQDKVTYGTEDYHHPCTSFVWNTSEMFGFTKGCLPLHRWDELNSFFKKAGAKIIFGLNALAGKSIKSGYAVGPWDHSNAESFIRYTVKKNYTIHGWELGNELCGNGIGTSVSANQYVSDVASLRFIIQNAYRGIEPKPLLISPGGFFDATWFKEFVTKAGKSVDVVTHHIYNLGPGVDEHITEKILDPSYLDVEASTFNSLKNILRSSATSATAWVGEAGGAYNSGHHLVSDAFVYSFWYLDQLGMSATYDTRTYCRQTLIGGNYGLLNTSTFIPNPDYYSALLWHRLMGQRVLSTSFYGTKKIRTYAHCAKKSQGITILLLNLGNSTTVEAKVALRFAKEPYGRVKFREEYHLTTQSQNLHSQVMLLNGNILSVNKDGDIPPLKPLYVDPSKPIVVGPFSVVFAHIPDIILPACT 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1217 522 Pfam Glycosyl hydrolase family 79, N-terminal domain 38 351 IPR005199 GO:0016020|GO:0016798
Lal7g1217 522 PANTHER HEPARANASE-LIKE PROTEIN 3 452 521 - -
Lal7g1217 522 PANTHER HEPARANASE-LIKE PROTEIN 3 13 442 - -
Lal7g1217 522 Gene3D Glycosidases 72 393 - -
Lal7g1217 522 SUPERFAMILY (Trans)glycosidases 50 395 IPR017853 -
Lal7g1217 522 PANTHER HEPARANASE-RELATED 452 521 - -
Lal7g1217 522 PANTHER HEPARANASE-RELATED 13 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1217 Lal-Chr7 17828259 17831721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1217 11 522 Glycoside Hydrolase AT5G61250 44.341 1.73e-168 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1217 K07964 - gmx:100778008 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1217 7 17828259 17831721 Lal7g1217 7 17828259 17831721 ECH
Lal7g1217 7 17828259 17831721 Lal19g1350 19 16356498 16360020 LSH
Lal7g1217 7 17828259 17831721 Lal17g1396 17 15366281 15371004 PCT
Lal7g1217 7 17828259 17831721 Lal21g1144 21 14076455 14083594 PCT
Lal17g1396 17 15366281 15371004 Lal7g1217 7 17828259 17831721 PCT
Lal21g1144 21 14076455 14083594 Lal7g1217 7 17828259 17831721 PCT