Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1144 ATGGGTTCAGGGATCAAGGTTCAGGGTATATTGTTTTGGGTGTTGTACTTAGCAAGTTTGAGTTTGATTGTTGTGAAAACAGTGAATGGTGAAAGCAAAGGTGTAACAGTGAAAGGGATAGTTGTAATTAATGAGAGTACTGTGATTGGGAATATTGATAATGATTTTGTATGTGCAACTCTTGATTGGTGGCCCCCAGAGAAATGTGACTATGGAAGATGCAGTTGGGGTCATGCATCACTTTTCAATTTGGACCTGAACAACAAAACTTTTTTGAATGCAGTGAAAGCATTTTCACCTTTGAAAATTAGATTAGGTGGAACTTTGCAAGATAAGCTTATATATGGAACTGAAGATAATAAACAACCTTGTACTCCTTTCTTTGCTAACAAATCTGAAATGTTTGGTTTCACAAAAGGGTGTCTCCCTATGAAGAGATGGGATGAACTTAACAAATTTTTTGCAAATGCTGGGGCTAAGATTATCTTTGGATTAAATGCTCTTACTGGAAAAACTATAGAATATGGTTCTGCTGTTGGACCTTGGAACTACACCAATGCTGAATCATTTATTCGTTATACTGTCTCAAAGAACTACACCATTTTTGGATGGGAACTTGGTAATGAATTGAGTGGGAAAGGAATTGGAACTAGTATTTCTGCACGCCAATATGCTTATGATGTTGCTGCTATGAAAGACATAGTTTACAAAGCATATGAAAAAATTGATCCTAAGCCACTAATAATTGCACCTGGAGGCTTCTTTGATGCAAATTGGTTCAAGGAATTTGTAACCAAATCTAACACATCTTTGGAAGTGGTTTCACACCACATTTATAACCTTGGACCAGGAGTTGATGAGCACCTTGTTGATAAAATTCTTAATCCTTTGTACCTTGATGGAGAGGCACACACATTTGCAAACCTCAAAAATGTACTTGCGAGTTCGGGTACCTCAGCGACGTCGTGGGTTGGTGAATCGGGAGGGGCTTACAATAGCGGCCGACATCTTGTATCCGATTCATTTGTATATAGTTTCTGGTATTTGGATCAGCTTGGCATGTCAGCTACTTTTGACACTAAAACTTATTGCAGACAAAGCTTGATAGGAGGAAATTATGGTTTACTTAATACCACTAATTTCACGCCAAATCCTGACTATTACAGTGCTCTTCTGTGGCATAGACTCATGGGAAGACGTGTGCTATCGACTGCCTTCATGGGTTCAAGCAAGTTAAGAGCTTATGCACACTGTGCAAAACAATCAAAAGGAATCACAATACTATTGATGAACCTTGACAACAGTACAACTGTTGAAACTGAAGTGGCCCTTAGAAAGAATTTGTGGCATAAAAATATGTCTGATGATTCAAAAGAAATGAAGCTAAATTTCCTTAGTGGAACAGAAAGAGCAAGAGAAGAGTACCATCTAACACCACATGATGGAAATATACATAGCCAAATAATGGCTTTAAATGGAAACATTCTAACAGTAAACTCAAATGGGGAAATTCCTTCTTTGCAGCCTATATATGTAAACCCATCAAACCCAATTGTTGTTGCTCCTTTCTCTATTGTATTTGCCCATATACCAGATGCTGTTGTTACAGCTTGCAAATAG 1620 0.3784 MGSGIKVQGILFWVLYLASLSLIVVKTVNGESKGVTVKGIVVINESTVIGNIDNDFVCATLDWWPPEKCDYGRCSWGHASLFNLDLNNKTFLNAVKAFSPLKIRLGGTLQDKLIYGTEDNKQPCTPFFANKSEMFGFTKGCLPMKRWDELNKFFANAGAKIIFGLNALTGKTIEYGSAVGPWNYTNAESFIRYTVSKNYTIFGWELGNELSGKGIGTSISARQYAYDVAAMKDIVYKAYEKIDPKPLIIAPGGFFDANWFKEFVTKSNTSLEVVSHHIYNLGPGVDEHLVDKILNPLYLDGEAHTFANLKNVLASSGTSATSWVGESGGAYNSGRHLVSDSFVYSFWYLDQLGMSATFDTKTYCRQSLIGGNYGLLNTTNFTPNPDYYSALLWHRLMGRRVLSTAFMGSSKLRAYAHCAKQSKGITILLMNLDNSTTVETEVALRKNLWHKNMSDDSKEMKLNFLSGTERAREEYHLTPHDGNIHSQIMALNGNILTVNSNGEIPSLQPIYVNPSNPIVVAPFSIVFAHIPDAVVTACK 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1144 539 SUPERFAMILY (Trans)glycosidases 52 397 IPR017853 -
Lal21g1144 539 Pfam Glycosyl hydrolase family 79, N-terminal domain 40 353 IPR005199 GO:0016020|GO:0016798
Lal21g1144 539 Gene3D Glycosidases 74 395 - -
Lal21g1144 539 PANTHER HEPARANASE-RELATED 7 539 - -
Lal21g1144 539 PANTHER HEPARANASE-LIKE PROTEIN 3 7 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1144 Lal-Chr21 14076455 14083594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1144 14 538 Glycoside Hydrolase AT5G61250 46.369 1.45e-173 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1144 K07964 - gmx:100802477 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1144 21 14076455 14083594 Lal21g1144 21 14076455 14083594 ECH
Lal17g1396 17 15366281 15371004 Lal21g1144 21 14076455 14083594 LSH
Lal7g1217 7 17828259 17831721 Lal21g1144 21 14076455 14083594 PCT
Lal19g1350 19 16356498 16360020 Lal21g1144 21 14076455 14083594 PCT
Lal21g1144 21 14076455 14083594 Lal7g1217 7 17828259 17831721 PCT
Lal21g1144 21 14076455 14083594 Lal19g1350 19 16356498 16360020 PCT