Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g0873 ATGGGCGAGGAAGAGAAGAAACCGGAAGAAAGCAAAGTGGAGGAGAAGAAGGTAGAGGAAGTGAAAGAGGAGAAGAAAGAAGGAAAAACGGAAGATAAGGGACCGGATAAAGCAGCGACGGAGAAAAAATCGGAGGAATCAAAGGATGGAAAGGAAACGCCGGAGAAACCTGCGCCGCCGCCGCCAGATATTGTGCTGAAAGTGTTCATGCATTGCGAAGGTTGTGCTCGCAAGGTTCGTCGTTCTCTTAAAGGGTTCCCTGGGGTTGAAGATGTAATAACAGATTGCAAGACTCACATAGTGGTGGTTAAAGGAGAAAAAGCAGATCCACTAAAGGTTCAAGAGAGAGTACAGAGAAAGAGCCATAGACAAGTTGAACTTCTTTCTCCCATCCCAAAGCCACCGGTGGAGGAAGAGAAAAAACCTGAGGAGGAGAAACCAAAGCCTGAAGAGAAGAAAGAAGAGCCTCAGGTTATTACTGTTGTTCTCAATGTTCACATGCATTGCGAAGCTTGCTCCCAGGAAATCAAGCGACGCATTGAGAAAATGAAGGGTGTGGAATCAGCGGAACCTGATCTGAAGAGTTCACAAGTGAGTGTGAAGGGAATTTTTGAGGCAGAAAAGCTAGTAGAATATGTGTATAAGAGAACTGGGAAACAAGCAGTGATAGTGAAGCAAGAGCCAGAAAAGAAAGAGGAAGCAAAAGAAGCTGCAAAGGAAGAGAAGAAAGCTGAGGAAGGTCACAAAGATAAAAAAGCAAGTGGTGAAGGAGAAGAGAACAAAGAAAAGAAAGAAGGAAAAGAAGCAAAAACAACTGAGGGAAATGCAGAAGAAACCAACCAAGTTTTGGAGCTTAAAAGGAATGAATACCATTACATTCCACCAAGGTATGAAATGGAGTATTATCATGCATATCCTGGTCCATCTTACCCTCCTCAAATTTTCAGTGATGAGAACCCTAATGCATGCACTGTCATGTAA 981 0.4353 MGEEEKKPEESKVEEKKVEEVKEEKKEGKTEDKGPDKAATEKKSEESKDGKETPEKPAPPPPDIVLKVFMHCEGCARKVRRSLKGFPGVEDVITDCKTHIVVVKGEKADPLKVQERVQRKSHRQVELLSPIPKPPVEEEKKPEEEKPKPEEKKEEPQVITVVLNVHMHCEACSQEIKRRIEKMKGVESAEPDLKSSQVSVKGIFEAEKLVEYVYKRTGKQAVIVKQEPEKKEEAKEAAKEEKKAEEGHKDKKASGEGEENKEKKEGKEAKTTEGNAEETNQVLELKRNEYHYIPPRYEMEYYHAYPGPSYPPQIFSDENPNACTVM 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g0873 326 SUPERFAMILY HMA, heavy metal-associated domain 156 227 IPR036163 GO:0046872
Lal7g0873 326 Pfam Heavy-metal-associated domain 163 217 IPR006121 GO:0046872
Lal7g0873 326 Pfam Heavy-metal-associated domain 66 119 IPR006121 GO:0046872
Lal7g0873 326 MobiDBLite consensus disorder prediction 133 157 - -
Lal7g0873 326 MobiDBLite consensus disorder prediction 113 157 - -
Lal7g0873 326 Coils Coil 231 251 - -
Lal7g0873 326 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 326 - -
Lal7g0873 326 CDD HMA 70 126 IPR006121 GO:0046872
Lal7g0873 326 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 326 IPR044577 GO:0046872
Lal7g0873 326 MobiDBLite consensus disorder prediction 1 56 - -
Lal7g0873 326 CDD HMA 162 221 IPR006121 GO:0046872
Lal7g0873 326 Coils Coil 11 31 - -
Lal7g0873 326 Gene3D - 155 224 - -
Lal7g0873 326 MobiDBLite consensus disorder prediction 1 64 - -
Lal7g0873 326 ProSiteProfiles Heavy-metal-associated domain profile. 70 126 IPR006121 GO:0046872
Lal7g0873 326 SUPERFAMILY HMA, heavy metal-associated domain 66 120 IPR036163 GO:0046872
Lal7g0873 326 MobiDBLite consensus disorder prediction 226 285 - -
Lal7g0873 326 Gene3D - 62 133 - -
Lal7g0873 326 ProSiteProfiles Heavy-metal-associated domain profile. 167 213 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g0873 Lal-Chr7 15281041 15282927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g0873 - - lang:109362245 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1019 19 14045113 14047087 Lal7g0873 7 15281041 15282927 ECH
Lal7g0873 7 15281041 15282927 Lal7g0873 7 15281041 15282927 ECH
Lal14g1448 14 15621522 15623583 Lal7g0873 7 15281041 15282927 LSH
Lal7g0873 7 15281041 15282927 Lal19g1019 19 14045113 14047087 LSH
Lal7g0873 7 15281041 15282927 Lal4g0706 4 5730212 5732857 PCT
Lal4g0706 4 5730212 5732857 Lal7g0873 7 15281041 15282927 PCT