Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1448 ATGCAAACAAACCCCACCACTCTACGCAAAATAAAAAGACCCAAAAACTTTCACAACAGCAAAAGTAAGCAGCAACTAACACCAGCATCACCAAGCTTATCCCCAAGTGTTTCTCTTAATTCTGAACAACAACATTTGAATCCAATGGGCGAGGAAGAGAAGAAACCAGAAGAAAACAAAGTGGTGGAGAAGAAAGCAGAGGAAGTGAAAGAGGATAAAAAAGAAGGAAAAGAAGAAGAAAAGAAACAGGAAAAAGCGGCGAAGGAATCAAAAGATGGGAAGGAAACGAAAGATCAAGAACCTACGCCGCCCCCAGAGATTGTGCTGAAAGTGTTCATGCATTGCGAAGGTTGTGCTCGCAAGGTTCGTCGCTCTCTAAAAGGGTTCCCAGGGGTTGAAGATGTAATAACAGATTGCAAGACTCACAAGGTGGTGGTTAAAGGAGAAAAAGCAGATCCACTAAAGGTTCAAGAAAGAGTGCAGAGGAAAAGCCATAGACAAGTTGAGCTTCTCTCTCCCATCCCAAAGCCACAAGCAGAGGAAGACAAAAAACCTGTGGAAGAGAAGCCCAAGCCCGAGGAGAAAAAAGAAGAGCCTCAGGTTATCACAGTTGTTCTAAATGTTCACATGCATTGTGAAGCTTGCTCCCAGGAAATCAAGCGGCGCATTGAGAAAATGAAAGGCGAGTTACAATTTCTCTTTAAATTTGTGACCTTTCAATTCAGTGTGGAATCAGCTGAACCTGATCTGAAGAATTCACAAGTGAGCGTGAAGGGAGTGTTTGAGGCAACAAAATTGTTGGAATATGTGCACAAGAGGACTGGGAAAAAAGCAGTAATAGTGAAGCAAGAGGCAGAAAAGAAAGAGGAACCAAAAGAAGCTGCGAAGGAAGAGAAGAAAGCTGAGGAAGGTGAGAAGGGAAATGGTGAAGGAGAAGAGAACAAAGAAAAGAAAGAAGGAGAAGAAGCTAAACCAGTTGAGGGAAATGCAGAAGAAGAGATAAACAAGGTTATAGATATGAAAAGGAACGAGTACTATTACAATCCACCAAGAGAGTACTATCATGCTTATCCTGGCCCAGCTTACCCACCTCAGATATTCAGTGATGAGAACCCCAATGCATGCACTGTCATGTAA 1137 0.4257 MQTNPTTLRKIKRPKNFHNSKSKQQLTPASPSLSPSVSLNSEQQHLNPMGEEEKKPEENKVVEKKAEEVKEDKKEGKEEEKKQEKAAKESKDGKETKDQEPTPPPEIVLKVFMHCEGCARKVRRSLKGFPGVEDVITDCKTHKVVVKGEKADPLKVQERVQRKSHRQVELLSPIPKPQAEEDKKPVEEKPKPEEKKEEPQVITVVLNVHMHCEACSQEIKRRIEKMKGELQFLFKFVTFQFSVESAEPDLKNSQVSVKGVFEATKLLEYVHKRTGKKAVIVKQEAEKKEEPKEAAKEEKKAEEGEKGNGEGEENKEKKEGEEAKPVEGNAEEEINKVIDMKRNEYYYNPPREYYHAYPGPAYPPQIFSDENPNACTVM 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1448 378 MobiDBLite consensus disorder prediction 20 46 - -
Lal14g1448 378 ProSiteProfiles Heavy-metal-associated domain profile. 113 169 IPR006121 GO:0046872
Lal14g1448 378 MobiDBLite consensus disorder prediction 1 107 - -
Lal14g1448 378 SUPERFAMILY HMA, heavy metal-associated domain 199 281 IPR036163 GO:0046872
Lal14g1448 378 SUPERFAMILY HMA, heavy metal-associated domain 108 163 IPR036163 GO:0046872
Lal14g1448 378 Coils Coil 59 86 - -
Lal14g1448 378 MobiDBLite consensus disorder prediction 284 335 - -
Lal14g1448 378 CDD HMA 113 169 IPR006121 GO:0046872
Lal14g1448 378 CDD HMA 205 278 IPR006121 GO:0046872
Lal14g1448 378 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 49 378 IPR044577 GO:0046872
Lal14g1448 378 MobiDBLite consensus disorder prediction 176 198 - -
Lal14g1448 378 Gene3D - 198 281 - -
Lal14g1448 378 Pfam Heavy-metal-associated domain 206 277 IPR006121 GO:0046872
Lal14g1448 378 Pfam Heavy-metal-associated domain 109 162 IPR006121 GO:0046872
Lal14g1448 378 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3-LIKE 49 378 - -
Lal14g1448 378 MobiDBLite consensus disorder prediction 156 198 - -
Lal14g1448 378 Gene3D - 104 176 - -
Lal14g1448 378 MobiDBLite consensus disorder prediction 47 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1448 Lal-Chr14 15621522 15623583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1448 - - lang:109362245 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1448 14 15621522 15623583 Lal14g1448 14 15621522 15623583 ECH
Lal14g1448 14 15621522 15623583 Lal7g0873 7 15281041 15282927 LSH
Lal14g1448 14 15621522 15623583 Lal19g1019 19 14045113 14047087 LSH
Lal14g1448 14 15621522 15623583 Lal4g0706 4 5730212 5732857 PCT
Lal4g0706 4 5730212 5732857 Lal14g1448 14 15621522 15623583 PCT