Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0706 ATGGGAGAGGAAGAAAACAAACCAGACCAACCCAAAAAGCCAGAAGAAGAAGAGAAGAATAAAAAGAAGGAAGAAGAAGAAGAAGAAAAACCAGCTGAGGAGAAAAAACCAGAAGAACCCAAAACCGAAGCTGCTTCAACGCCGCCACCGCCGCCGGAAATTCTACTTAAAGTGTTCATGCATTGTGAAGGTTGTGCTCGTAAGGTTCGTCGGTCCCTTAAAGGATTCCCAGGGGTTGAAGATGTGATTACAGATTGTAAGTCTCACAAGGTAATAGTTAAAGGAGAAAAAGCAGATCCACTGAAAGTTTTGGAGAGAGTACAGAGAAAGAGTCATAGAAAGACTGAACTTCTTTCTCCTATCCCAAAACCTCCATCTGAGGAAGACAAAAAGCCCTCAGAGGAAGAGAAACCCAAGCCAGAAGAGAAGAAAGAAGAGCCTCAGATTGTGACTGTTGTTCTGAAAGTTCACATGCATTGTGAAGCTTGTGCTCAAGAAATCAAAAGACGCATACAGAGGATGAAGGGAGTGGAATCAGCAGAACCAGATTTTAAAAACTCACAAGTGAGCGTTAAAGGGGTTTATGATCCAGCCAAGTTGGTTGAATATGTGTACAAGAGAAGTGGGAAACAAGCATTGATAATGAAGCAAGAGCCAGAACCAACCAAGGAAGAGAAACCAGAGGAAGCCAAAGAGGAAAAGAAAAAAGAGGAAGAAAATAAAGAGAAGAAAACTGAAGAAGAAAAAGAAGAAGAAAAGAAAGAAGAAGAGAAGAAAAAACAAGAAACAGAGGGAGATACCAAACCAGAAGATGAAGCAGCTATAGAAGAAACCAAGATTGCTGAGGTGAAAAAAAATGAATATTATTACTACCCACCAAGGTCTGGCATGGAAATATATGCATACCCAACTTACCCTGCATACCCACCACAGTTATTCAGTGATGAGAACCCAAATGCATGCAGTGTCATGTAA 975 0.4092 MGEEENKPDQPKKPEEEEKNKKKEEEEEEKPAEEKKPEEPKTEAASTPPPPPEILLKVFMHCEGCARKVRRSLKGFPGVEDVITDCKSHKVIVKGEKADPLKVLERVQRKSHRKTELLSPIPKPPSEEDKKPSEEEKPKPEEKKEEPQIVTVVLKVHMHCEACAQEIKRRIQRMKGVESAEPDFKNSQVSVKGVYDPAKLVEYVYKRSGKQALIMKQEPEPTKEEKPEEAKEEKKKEEENKEKKTEEEKEEEKKEEEKKKQETEGDTKPEDEAAIEETKIAEVKKNEYYYYPPRSGMEIYAYPTYPAYPPQLFSDENPNACSVM 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0706 324 SUPERFAMILY HMA, heavy metal-associated domain 147 216 IPR036163 GO:0046872
Lal4g0706 324 SUPERFAMILY HMA, heavy metal-associated domain 54 109 IPR036163 GO:0046872
Lal4g0706 324 MobiDBLite consensus disorder prediction 1 42 - -
Lal4g0706 324 Pfam Heavy-metal-associated domain 57 110 IPR006121 GO:0046872
Lal4g0706 324 Pfam Heavy-metal-associated domain 154 204 IPR006121 GO:0046872
Lal4g0706 324 MobiDBLite consensus disorder prediction 107 147 - -
Lal4g0706 324 ProSiteProfiles Heavy-metal-associated domain profile. 158 213 IPR006121 GO:0046872
Lal4g0706 324 MobiDBLite consensus disorder prediction 217 279 - -
Lal4g0706 324 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 324 IPR044577 GO:0046872
Lal4g0706 324 MobiDBLite consensus disorder prediction 214 279 - -
Lal4g0706 324 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 324 - -
Lal4g0706 324 Coils Coil 227 266 - -
Lal4g0706 324 Gene3D - 147 214 - -
Lal4g0706 324 ProSiteProfiles Heavy-metal-associated domain profile. 60 116 IPR006121 GO:0046872
Lal4g0706 324 CDD HMA 153 212 IPR006121 GO:0046872
Lal4g0706 324 MobiDBLite consensus disorder prediction 1 54 - -
Lal4g0706 324 Gene3D - 51 123 - -
Lal4g0706 324 Coils Coil 15 36 - -
Lal4g0706 324 CDD HMA 60 116 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0706 Lal-Chr4 5730212 5732857 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0706 - - gmx:100787932 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0706 4 5730212 5732857 Lal4g0706 4 5730212 5732857 ECH
Lal14g1448 14 15621522 15623583 Lal4g0706 4 5730212 5732857 PCT
Lal7g0873 7 15281041 15282927 Lal4g0706 4 5730212 5732857 PCT
Lal19g1019 19 14045113 14047087 Lal4g0706 4 5730212 5732857 PCT
Lal4g0706 4 5730212 5732857 Lal14g1448 14 15621522 15623583 PCT
Lal4g0706 4 5730212 5732857 Lal7g0873 7 15281041 15282927 PCT
Lal4g0706 4 5730212 5732857 Lal19g1019 19 14045113 14047087 PCT