Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0576 ATGGAATCAGCAATGGAGAAGGTGCAAAGTTGTGTTGTTGAAAACGGAGTTGACTTTAAGTCCTGCCACATGCAGAAGTTCAAGCTTTATGAGACTCGTTCGAGATTTTATCTGTTTGGAAGAGATAAAAGTAGAACACTTTGGAAGGTATTGAAGATTGACAGGTTAGAGCCTTCAGAACTAAATATCACTGAAGATACAACACTGTACTCAGAAACTGAGTGTTGTGGCCTTCTGAAGAGAATAGATGAAGGAAACAAGTCCACAGGGGGGCTTAAATTTGTAACAACTTGCTATGGAATCATTGGATTTATCAAATTTCTTGAGCCATACTACATGCTGCTTATAACAAAACGGAGGAAGATCGGAACAATCTGTGGGCACACTATATATGCTATCGCAAAGAGCGAATTGGTTCCAATTCCTCATGCTACTGTGCGAACCAAAATGGCATATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTAGATCTTACGAAGGACTTCTTTTTCAGCTACTCATATAATGTCATGTTCAGTCTCCAAAAGAACTTATCCGATCATAATATGATGGGAAAATCACTTTATGAAACCATGTTTGTTTGGAATGAGTTTTTGACTCGTGGAATTCAGAATGATCTCCAGAATACTTCCTGGACAGTTGCCTTAGTGTACGGGTTTTTTAAGCAGGTCAATCTTTCTATATCTGGCAGGGAGATAAACTTGACTATCATTGCTAGGCGATCAAAGCACTACGCCGGGACCAGATATTTGAAAAGAGGCGTGAATGAAAAGGGTCGAGTAGCTAATGATGTTGAGACTGAGCAGATAGTCTTTGCAGATGCTCATGATGGATGCCCAATGCAAATAAGTTCCGTGGTGCAGATTCGGGGTTCAATTCCTTTGTTCTGGTCTCAGGAAGCCTCTCCGTTAAATTTAAAACCAGACATAATATTATCAAAGAAGGACCAAAATTTTGAAGCTACAAGACTTCATTTTGATAATCTTGCCGACAGATATGGAAAACCAATTATTATATTGAACTTGATTAAGACAAGTGAGAAAAAGCCTAGAGAAACTATTCTGCGAGCCGAGTTTGCAAATGCTGTTAGGTCTATTAATAACAGTTTGAAAGGGGGAAATCGCCTGAGATTCCTTCATTGGGATCTGCATCGGCACTCAAGACGCAGCAAAGCAACTAATGTGTTGTCACAACTGGGTAAATTGGCTGCATATGCATTGAAGCTAACTGGGATTTTCTACTGTCCGGTGACACCAAATTTGAAGCTAGAGGGTTTGTTCCGTGATTCCTACTCTGAGAATATCAATGTCATTGGTGACTGTGTCGCGGAACAAGATTGTATAAACAATGATAATGTTGATAAGGAAACAGAGGTTAGCGATTGTTATGATAGTGGTGGTGAGAGCAAAGATTATTGTGTCAAGCCCCGGATACTTCAATCTGGGGTCTTGAGGACTAATTGCATAGACTGTCTAGATCGTACCAATGTTGCTCAGTATGCTTATGGACTAGCTGCACTTGGACTTCAGCTACAAGTTCTAGGGTTTTCTGAATCCCCATATATTTCTCTTGATAACCCTTTGGCAAAGGATTTAATGACAATGTATGAGTCCATGGGTGACACATTAGCCTTTCAATATGGGGGTTCTGCTGCACACAATAAGATATTTTCTAAGAAAAGAGGTCAATGGAAGGCAGCCACACAGTCCCAGGAATTCATCCGAACCCTACAGCGTTACTATAACAACACATATGCTGATGGAAATAAACAGAAAGCGATTAACCTATTCTTGGGACATTTTCAAGCACAGCAAGGCAAACCAGCACTGTGGGAGCTGGATTCAGATCAGCACCACACTATGGGGAAAGGTGGGCCATATCCAGAAGTTGACGATGTCAGGTCAACTATTAAAAGATCGCTATCAGCTGACAACTTTCTCTGTGAAAGTGGCACTACAGTTACGGAGTTAGGTGTTACAAATTATCCGCATCCTTCTGAAAAAACAAATAAGGGTAGTGTTTCAGAGTCTACTCAAGACACTCTTACTTTTGGAAGTGAGATTTGTCATTGCAGGAAAATACATGGTGGAACGTACAAGGACCAGCATTGTGACTGTGATCATGTTTGTTATGATGAACATGGAGATGCATATGACTGCTCCAATTTCCTTGATGTGAACTGGCTTTATTCTTCTAGAAATTCCTTTGACGAGGAACTCCTTCAAAGATCAGCTACCATCTCCTCAGAGAAAATTGTGAATGAACTGATAAATGACACAACTCGATATGCTACTGAAACTGGATCCAGCATTAAGGGGAAGCAGAGTCAACCAGAGCTCAAAAAAGGTGCTGAGTATACCGAAAGCTTTGAGTGCTGGGTTCGAAGCGAGACATTTTTTCTTTAA 2436 0.4056 MESAMEKVQSCVVENGVDFKSCHMQKFKLYETRSRFYLFGRDKSRTLWKVLKIDRLEPSELNITEDTTLYSETECCGLLKRIDEGNKSTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHTIYAIAKSELVPIPHATVRTKMAYSKDENRYKKLLCSVDLTKDFFFSYSYNVMFSLQKNLSDHNMMGKSLYETMFVWNEFLTRGIQNDLQNTSWTVALVYGFFKQVNLSISGREINLTIIARRSKHYAGTRYLKRGVNEKGRVANDVETEQIVFADAHDGCPMQISSVVQIRGSIPLFWSQEASPLNLKPDIILSKKDQNFEATRLHFDNLADRYGKPIIILNLIKTSEKKPRETILRAEFANAVRSINNSLKGGNRLRFLHWDLHRHSRRSKATNVLSQLGKLAAYALKLTGIFYCPVTPNLKLEGLFRDSYSENINVIGDCVAEQDCINNDNVDKETEVSDCYDSGGESKDYCVKPRILQSGVLRTNCIDCLDRTNVAQYAYGLAALGLQLQVLGFSESPYISLDNPLAKDLMTMYESMGDTLAFQYGGSAAHNKIFSKKRGQWKAATQSQEFIRTLQRYYNNTYADGNKQKAINLFLGHFQAQQGKPALWELDSDQHHTMGKGGPYPEVDDVRSTIKRSLSADNFLCESGTTVTELGVTNYPHPSEKTNKGSVSESTQDTLTFGSEICHCRKIHGGTYKDQHCDCDHVCYDEHGDAYDCSNFLDVNWLYSSRNSFDEELLQRSATISSEKIVNELINDTTRYATETGSSIKGKQSQPELKKGAEYTESFECWVRSETFFL 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0576 811 Pfam SacI homology domain 99 397 IPR002013 GO:0016791
Lal6g0576 811 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 9 806 - -
Lal6g0576 811 MobiDBLite consensus disorder prediction 668 687 - -
Lal6g0576 811 ProSiteProfiles Sac phosphatase domain profile. 163 559 IPR002013 GO:0016791
Lal6g0576 811 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 9 806 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0576 Lal-Chr6 3699494 3708334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0576 24 804 Acyl Lipid Metabolism Gene Families AT5G20840 55.006 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0576 K22913 - gmx:100806380 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0577 22 3948468 3951339 Lal6g0576 6 3699494 3708334 LSH
Lal6g0576 6 3699494 3708334 Lal22g0519 22 3441846 3450263 LSH
Lal6g0576 6 3699494 3708334 Lal18g0318 18 2663807 2672737 LSH