Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0318 ATGGTGGAAGAAGAAGAAGTAGCAATGGAGAATCAGGTTGTGAATGAAGGAGTTGACTTCAAGTTTTCAAGCTGCTCTTTGCAAAATTTCAACCTCTATGAGACTCATTCGAAATATTATATTATTGGAAGAGACAAGAGCAGATCACATTGGAAGGTGTTGAAGATTGACAGATTAGAACCGTCTGAATTAAATATCACGGAAGATCCTACAATATTCTCAGAAATCGAGTGTATTGACCTCCTGAACCGGATCCGCGAAGGAAACAAGTCAACGGGGGGACTTAAATGTGTAACAACTTGTTATGGAATCATTGGATTTGTGAAATTTCTTGAGCCATACTACATGATGCTTATAACAAAACGAAGGAAGATTGGCACAATATGTGGGCATGCTATCTATGCTGTCACAAAGAGCGAAATGATTCCGGTTCCACATGCTACTGTGCAATCCAAAGTGGCATATTCTAGTGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTCACAAAGGACTTCTTCTTCAGCTACTCATACCATGTCATGCTTAGTCTTCAAAAGAACATGTCTGATAATTTTACTACTGGAAAGTCACTATATAAGACAATGTTTGTTTGGAACGAGTTCCTAACTCGTGAGATCAGGGATATTCTCCAGAATACTTCCTGGACAGTTGCATTAGTACACGGCTTTTTTGAACAGGTCAAACTTTCTATATCTAAAAGGGAGTTCTACTTGACTGTCATTGCTAGACGCTCACGACATTTTGCTGGGACCAGATATTTGAAGCGGGGAGTAAATGAAAAGGGTAGGGTTGCTAATGATGTTGAGACGGAGCAGATAGTCTTTGCAGATGCTCATGATGAATGTCCAATGCAAATCAGTTCTGTGGTGCAGATTCGCGGTTCAATCCCACTTTTCTGGTCTCAGGAGACCTCTCGGTTGAATATAAGACCTAACATTATGTGTATGAAATGGAAAAAACTTCCTTTATTTGTTCCTTACTCTTCTTCTGTTTACACTGACATTGGTTCTTTCTCCCCAGTATCAAAGGAGGACCGTAGTTTTGAAGCCACAAGACTGCATTTTGAAAATCTTGCTAAGAGATATGGAAATCCTATCATTATATTGAACTTAATCAAGACGCGTGAGAAGAAGCCTCGAGAAAGTATTCTTCGAGCTGAATTTGTAAATGCTGTTAGGTCTATCAATAAAAATTGGAGAGGGGAAAATCGCCTGAAGTTCCTTAACTGGGATTTGAATCTGCACTCAAGAAGCAAAGCCACTAATGTATTGACACAACTGGGAAAAGTTGCTGCATATGCATTGAAGTTTACTGGCATTTTCTACTGTCAAGTGACACCGAAGCTGGAGGGATTGTTAGGTTATTCCAACTCTGAGAAATGTGTTGATGTGGGCACCGTAATTAACAATCATTTGCTCGCTGGTGATGTTAGCGGAGATTGTGGTGTCAAACCTCGGATGCTTCAGGCCGGGGTCTTGAGGACCAATTGCATAGACTGCTTAGATCGTACCAATGTTGCTCAATTTGCATATGGACTTGCTGCACTTGGATGTCAGCTCCAAGCCTTAGGATTTATTGAATCCTCGTATATTGATCTTGATAGCCATTTGGCAAAGGAGACGATGAAAGTCTATGAGTCCATGGGTGACACAATAGCTTTGCAATATGGGGGTTCTGCTGCACAGAAAAAGATATTTTCTGAGAAAAGAGGTCAATGGAAGCCAGCAACACAATCTCAGGAATTGATTCGAACCCTACAGCGTTATTGTAACAATACTTACTTTGATGGCAATAAGCAGAAGGCTATTAACTTGTTCTTGGGTCATTTTCAGCCACAACAGGATAAGCCAGCACTGTGGCAGATGGATTCAGATCAACATTACCTTGCTGGGAAACATGCCCCACATTCGGTACATGACAGTGTTAGGCCAACTATTAAAAGATCACTGTCAGACGGCATTATTCTCAGTGAAAGTAATGCTACAATCAGGAACATGGGAGTTACATTATGCAAACACTCATCTGCAGAAATCGATAACAGTCATCCTTCAGAGTCAACTGCAGATATCTTAACTTGTGAAAGTGATATTTGTCATTGCAGACAGATATATAGTGGAACCGTCAAGGAACGATCTTGTGAAACTGATCAAGTTTGTTTTGATGGACATGGAGATTTGTATGACTTCTCCGATGTCTTCGATTTCGACTGGCTTACTTCTTCTCCAAATACTCATGCAGACGAAGTGCTTGGGGGGTGTTCCAGCATTTCATCAGAGAATATTGTGAATGAAGGAAAAACTGAGACAACATGTGCAAGTGAATCTGGATCCAGCATTAAGGGAAAGATGGAAGGTATAGAAGAGCTCAACAAAGATGAAAATTACTCCAAAAGCTTTGGAAAATGGGTAGAAGGAGACATGTTTTTTCTTTAA 2463 0.404 MVEEEEVAMENQVVNEGVDFKFSSCSLQNFNLYETHSKYYIIGRDKSRSHWKVLKIDRLEPSELNITEDPTIFSEIECIDLLNRIREGNKSTGGLKCVTTCYGIIGFVKFLEPYYMMLITKRRKIGTICGHAIYAVTKSEMIPVPHATVQSKVAYSSDENRYKKLLCSVDLTKDFFFSYSYHVMLSLQKNMSDNFTTGKSLYKTMFVWNEFLTREIRDILQNTSWTVALVHGFFEQVKLSISKREFYLTVIARRSRHFAGTRYLKRGVNEKGRVANDVETEQIVFADAHDECPMQISSVVQIRGSIPLFWSQETSRLNIRPNIMCMKWKKLPLFVPYSSSVYTDIGSFSPVSKEDRSFEATRLHFENLAKRYGNPIIILNLIKTREKKPRESILRAEFVNAVRSINKNWRGENRLKFLNWDLNLHSRSKATNVLTQLGKVAAYALKFTGIFYCQVTPKLEGLLGYSNSEKCVDVGTVINNHLLAGDVSGDCGVKPRMLQAGVLRTNCIDCLDRTNVAQFAYGLAALGCQLQALGFIESSYIDLDSHLAKETMKVYESMGDTIALQYGGSAAQKKIFSEKRGQWKPATQSQELIRTLQRYCNNTYFDGNKQKAINLFLGHFQPQQDKPALWQMDSDQHYLAGKHAPHSVHDSVRPTIKRSLSDGIILSESNATIRNMGVTLCKHSSAEIDNSHPSESTADILTCESDICHCRQIYSGTVKERSCETDQVCFDGHGDLYDFSDVFDFDWLTSSPNTHADEVLGGCSSISSENIVNEGKTETTCASESGSSIKGKMEGIEELNKDENYSKSFGKWVEGDMFFL 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0318 820 Pfam SacI homology domain 102 423 IPR002013 GO:0016791
Lal18g0318 820 ProSiteProfiles Sac phosphatase domain profile. 166 568 IPR002013 GO:0016791
Lal18g0318 820 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 351 819 IPR043573 GO:0043813|GO:0046856
Lal18g0318 820 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 11 327 IPR043573 GO:0043813|GO:0046856
Lal18g0318 820 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 11 327 - -
Lal18g0318 820 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 351 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0318 Lal-Chr18 2663807 2672737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0318 27 813 Acyl Lipid Metabolism Gene Families AT5G20840 50.716 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0318 K22913 - gmx:100806380 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0318 18 2663807 2672737 Lal18g0318 18 2663807 2672737 ECH
Lal6g0576 6 3699494 3708334 Lal18g0318 18 2663807 2672737 LSH
Lal22g0519 22 3441846 3450263 Lal18g0318 18 2663807 2672737 LSH