Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0519 ATGGAATCAACAGTGGAGAAGGTGCAGAGTTATGGTGTTGAAGATGGAGTTGACTTGAAGCCCTGTCACATGCAGAAGTTCAAGCTCTATGAGACTTGTTCGAGGTTTTATCTTATTGGAAGAAACAAAAGTAGAACACTGTGGAGGGTATTAAAGATTGATAGATCAGAGCCTTCGGAACTAAATATCACTGAAGATTCAACAGTCTACTCAGAAACTGACTGTTATGACCTTCTGAGGAGAATACATGAAGGAAACAAATCCACAGGGGGACTTAAACTTGTAACAACTTGCTATGGAATCATTGGATTTATCAAATTTCTTGAGCCATACTACATGCTGCTAGTAACAAAACGGAGGAAGATCGGCACAATCTGTGGGCACACTATATATGCTATTGCAAAGAGCGAAGTGGTTCCAATTCCACACGCTACTGTGCGATCCAAAATGGCATATTCTAAGGATGAGAAAAGATACAAGAAGCTCCTATGCAGTGTGGATCTTACAAAGGACTTCTTTTTCAGCTACTCATACAATGTTATGCTTAGTCTCCAAAAGAACTTATCTGATCATAATATGATGGGAAAGTCACTTTATGAAACAATGTTTGTTTGGAATGAGTTTTTGACTCGTGAAATCCGGAACGGCCTCCAGAATACTTCCTGGACAGTTGCCTTAGTGCATGGGTTTTTTAAGCAGGCCAACCTATCTATATCTGACATGGAGATCAACTTGACTATCATTGCTAGGCGGTCAAGGCATTATGCTGGGACCAGATATTTGAAAAGAGGTGTGAATGAAAAGGGTCGAGTAGCTAATGATGTTGAGACTGAGCAGATAGTCTTTACAGATGCTCATGACGGATGCCCAATGCAAATAAGTTCCGTGGTACAGATACGGGGTTCAATCCCTTTGTTCTGGTCTCAGGAAGCCTCTCCATTGAATTTAAAACCCGGCATAATATTATCAAAGAAGGACCAGAACTTTGAAGCTACAAGACTTCACTTTGATAATCTTGTCAATAGATATGGAAATCCAATTATTATATTGAACTTGATTAAGACATTTGAGAAGAAGCCCCGAGAAACTATTCTGCGAGCCGAGTATGCAAATGCTGTTAGGTCTATCAACAACAGTTTGAGAGGGGAAAATCGCCTGTGGTTCCTTCATTGGGATCTGCATTGGCACTCAAGACGAAAAGCTACAAATGTGTTGTCACAGCTGGGGAAAGTGGCTGCATATGCATTGAAGCTAACTGGCATTTTCTACTGTCCAGTGACAGCGAATTTGACGGTAGAGGGTTTGTTCCATGATTCCTACTCTGAGAATAACAGTGTTGTCGACCACACTGTCGCAGAACAAGCTAGTACGAATAAGGATAATGTTGATAAGGAAACAGAAGTTAGCGAATGTTACTATAGTGGTGATGAGAACAAAGATTACAGTGTCAAACCCCAGATGCTTCAAGCAGGAGTGTTGAGGACTAATTGCATAGACTGTTTAGATCGTACCAATGTTGCTCAATATGCTTATGGACTAGCTGCACTTGAACGTCAGCTACAAGTTTTAGGGTTTTCTGAATCCTCATGTATTTATCTTGATCACCCTTTGGCAAAGGAATTAATGACAATGTATGAGTCCATGGGTGACACACTAGCCTTTCAATATGGGGGTTCGGCAGCGCACAATAAGATATTTTCTCAGAAAAGAGGTCAGTGGAAGGCAACCACGCAGTCTCAGGAATTCATCCGAACTCTGCAGCGCTACTATAACAACACATATGCTGATGGGAATAAACAGAAAGCGATTAACATATTCTTGGGACATTTTCAACCGCAACAAGGGAAACCAGCATTGTGGGAGATGGACTCCGATCAGCACCACACTGTCGGGAAAGGTGGGCTGTATTTCGAAGATGACAATGCCAGATATAATAATAAAAGATCGCTATCAGCCGGCAACATTCTCTATGAAAGTGGAAATACAGTTACAAATTGTCAGCCTTATTCTGAAAAAAATGATAACTGCTGTCCTTCAGAGTCTACTCCAGACATTGTTACTTGTGGAAGTGAGATTTGTCATTGCAGGAAAATACACAGGGGAATGTTCAAGGACCAAAATTGTGACAGTGATTACATTTGTCATGATGAACATGGAGATGCGTGTGACTGCTCCAATTTCCTTAATGTGGATTGGCTTTCTTCTTCTGGAAATTCCTGTGAAGAGGAATTGCTTGAAAGGTTAAACAGCATCTCCTCGGAGAATATTGCGAATGAACTAATAGCTGAGACAACTCCATCTGCAAGTAAATCTGGATCCAGCATGAAGAAGCAGAGTGGACCAGAGCTCAAGAAAGGCGCTGTGTACAGTGAAAACTTCGAACGCTGGGTTCGTGAGGAGACATTTTTTGTTTGA 2415 0.4128 MESTVEKVQSYGVEDGVDLKPCHMQKFKLYETCSRFYLIGRNKSRTLWRVLKIDRSEPSELNITEDSTVYSETDCYDLLRRIHEGNKSTGGLKLVTTCYGIIGFIKFLEPYYMLLVTKRRKIGTICGHTIYAIAKSEVVPIPHATVRSKMAYSKDEKRYKKLLCSVDLTKDFFFSYSYNVMLSLQKNLSDHNMMGKSLYETMFVWNEFLTREIRNGLQNTSWTVALVHGFFKQANLSISDMEINLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFTDAHDGCPMQISSVVQIRGSIPLFWSQEASPLNLKPGIILSKKDQNFEATRLHFDNLVNRYGNPIIILNLIKTFEKKPRETILRAEYANAVRSINNSLRGENRLWFLHWDLHWHSRRKATNVLSQLGKVAAYALKLTGIFYCPVTANLTVEGLFHDSYSENNSVVDHTVAEQASTNKDNVDKETEVSECYYSGDENKDYSVKPQMLQAGVLRTNCIDCLDRTNVAQYAYGLAALERQLQVLGFSESSCIYLDHPLAKELMTMYESMGDTLAFQYGGSAAHNKIFSQKRGQWKATTQSQEFIRTLQRYYNNTYADGNKQKAINIFLGHFQPQQGKPALWEMDSDQHHTVGKGGLYFEDDNARYNNKRSLSAGNILYESGNTVTNCQPYSEKNDNCCPSESTPDIVTCGSEICHCRKIHRGMFKDQNCDSDYICHDEHGDACDCSNFLNVDWLSSSGNSCEEELLERLNSISSENIANELIAETTPSASKSGSSMKKQSGPELKKGAVYSENFERWVREETFFV 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0519 804 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 10 800 - -
Lal22g0519 804 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 10 800 IPR043573 GO:0043813|GO:0046856
Lal22g0519 804 ProSiteProfiles Sac phosphatase domain profile. 163 558 IPR002013 GO:0016791
Lal22g0519 804 Pfam SacI homology domain 99 397 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0519 Lal-Chr22 3441846 3450263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0519 24 797 Acyl Lipid Metabolism Gene Families AT5G20840 54.680 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0519 K22913 - gmx:100806380 1255.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0576 6 3699494 3708334 Lal22g0519 22 3441846 3450263 LSH
Lal22g0519 22 3441846 3450263 Lal18g0318 18 2663807 2672737 LSH