Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0465 ATGGCATTCTCCACCGCTAACTCTCTCATTTCCACCAAACTCAACCAATCACCTTCCTCTTCCTTCCTCACCAGGCCCGGGCCCAAGCCTTATATTATAGCCGTCCACGCCGCCGAGCCCGCCAACAACTCCCTTGTTTCTGAAAAGCCCCTCAATCCATCGTCCCCCGTTGCCACAAGAAATGTGGCACAGGGGAAATGGGCCGTGGACAGCTGGAAATCCAAGAAGGCACTCCAGCTGCCCGAATACCCGAGTCAGGAGGACCTTGAATCGGTCCTCCGGACTCTGGATGCGTTCCCTCCAATCGTCTTCGCCGGCGAGGCGAGGACATTGGAGGAGCGTCTTGGAGAGGCTGCTATGGGAAATGCGTTTTTGTTACAAGGTGGAGATTGTGCTGAGAGCTTCAAGGAGTTCAACGCCATTAACATTCGTGACACCTTCAGAGTCATTCTCCAGATGGGTGTTGTTATGATGTTCGGTGGCCAAGTGCCTGTTATCAAGGTGGGTAGAATGGCGGGTCAGTTTGCGAAGCCGAGATCTGATGGGTTTGAGGAGAAGAACGGGGTGAAGCTGCCGAGTTACAGAGGGGACAACATTAATGGAGATGCTTTTAATGAGAAGTCAAGGACTCCTGATCCTCAGAGGATGATTAGAGCTTATACTCAAGCGGCAGCTACTCTGAATCTGTTGAGGTCTTTTGCCACAGGAGGGTATGCAGCTATGCAAAGGGTTATTGATTGGAATTTGGACTTCACCGATCACAGCGAGCAGGGAGACAGGTACCGAGAGCTTGCTCACCGAGTTGACGAGGCCCTTGGTTTCATGGATGCTGCTGGACTCAAGGGGGACCATCCCATAATGAAAACAACTGAATTCTGGACTTCTCATGAATGCTTATTATTGCCATATGAGCAATCACTCACTAGGTTGGATTCAACATCCGGACTCTACTATGACTGCTCTGCCCATATGATTTGGGTTGGTGAACGGACCAGGCAGCTGGATGGTGCACATGTTGAGTTTCTAAGAGGAGTAGCTAATCCCCTGGGAATTAAGGTAAGTGATAAGATGGATCCAAATGAGCTTGTTAAACTCATTGAGATTTTAAATCCCCAAAACAAAGCAGGGAGAATAACTATAATTACAAGGATGGGAGCTGAAAAAATGAGAGTTAAGCTTCCACATCTAATCAGGGCAGTGCGTGGAGCAGGGCAAATTGTCACATGGGTCAGTGATCCTATGCATGGAAACACCATCAAGGCTCCATGTGGTCTCAAAACACGCCCCTTCGATGCCATCAGGGCTGAGGTTACAGCATTCTTCGATGTGCATGAACAAGAAGGAAGCCACCCAGGAGGAGTTCACCTAGAGATGACAGGCCAGAATGTGACCGAGTGCGTTGGTGGGTCAAGGACAGTCACGTTTGATGACCTATCCTCACGTTACCACACACACTGTGACCCCAGGCTCAATGCTTCGCAAGCTCTTGAGCTTTCTTTCATCATCGCTGAACGGTTGAGGAGGACTAGGATCAGATCGCAGCAGCCTCTTGGCTCTACAGGACAGTAA 1569 0.499 MAFSTANSLISTKLNQSPSSSFLTRPGPKPYIIAVHAAEPANNSLVSEKPLNPSSPVATRNVAQGKWAVDSWKSKKALQLPEYPSQEDLESVLRTLDAFPPIVFAGEARTLEERLGEAAMGNAFLLQGGDCAESFKEFNAINIRDTFRVILQMGVVMMFGGQVPVIKVGRMAGQFAKPRSDGFEEKNGVKLPSYRGDNINGDAFNEKSRTPDPQRMIRAYTQAAATLNLLRSFATGGYAAMQRVIDWNLDFTDHSEQGDRYRELAHRVDEALGFMDAAGLKGDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKAGRITIITRMGAEKMRVKLPHLIRAVRGAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVTAFFDVHEQEGSHPGGVHLEMTGQNVTECVGGSRTVTFDDLSSRYHTHCDPRLNASQALELSFIIAERLRRTRIRSQQPLGSTGQ 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0465 522 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 67 509 IPR002480 GO:0003849|GO:0009073
Lal6g0465 522 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 26 517 IPR002480 GO:0003849|GO:0009073
Lal6g0465 522 Pfam Class-II DAHP synthetase family 67 503 IPR002480 GO:0003849|GO:0009073
Lal6g0465 522 Gene3D Aldolase class I 267 508 IPR013785 -
Lal6g0465 522 Gene3D Aldolase class I 100 266 IPR013785 -
Lal6g0465 522 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 26 517 - -
Lal6g0465 522 SUPERFAMILY Aldolase 61 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0465 Lal-Chr6 2944168 2948647 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0465 K01626 - gmx:100797019 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0465 6 2944168 2948647 Lal6g0465 6 2944168 2948647 ECH
Lal18g1160 18 14481073 14485188 Lal6g0465 6 2944168 2948647 LSH
Lal22g0437 22 2835808 2839611 Lal6g0465 6 2944168 2948647 LSH
Lal6g0465 6 2944168 2948647 Lal21g0476 21 3383305 3386935 PCT
Lal21g0476 21 3383305 3386935 Lal6g0465 6 2944168 2948647 PCT