Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0476 ATGACTGTCACCACTTCCAACTCTTTCATTCCCACCAAATCCTTAACCTCACTAACCCATTCCCTTTTTCCTTCCTCCAAATCAAATCAAGCATCCTTCCTCATTAAGCCCAACCCCGTTCCTTATATCCAAGCTGTTCATGCCGCCGGCGAGCCCTCAACACCTTCTACCACCACCGCCACCCGCCATGCAAAGTGGGCCATCGACAGCTGGAAATTCAAGAAGGCACTACAGCTTCCTGAATACCCAAACAAAGAGGCCCATAACTCTGTGCTGAAAACGCTCGAAGCATTTCCTCCAATTGTCTTCGCCGGTGAGGCGAAGAACCTCCAGAAGCGTCTCCGCGAGGCTGCCCTGGGGAATGCGTTCATTCTCCAGGGTGGCGACTGCGCCGATAGTTTCAAGGAGTTCAACGCCATCAACATTCGTGACACCTTTAGAATCCTTCTTCAAATGAGCGTTGTGATGATGTTGGGAGAATGGCGGGTCAGTTTGCGAAGCCGAGATCGAATCAATTCGAGGAGAAGAATGAATGGTGTGAAATTGCCAAGTTATCGAGGAGATAACGTGAATGGAGATGCTTTTGATGAGAAGGCGAGAATTCCTGATCCTGAAAGGATGATTAGAGCGTATTGTCAATCAGCTGCAACACTCAATCTTCTCAGGGCTTTTGCTACTGGTGGTTATGCTGCTATGCAAAGGGTCACACAATGGAATTTGGACTTTACACAACACGCCCAACAGGGAGACAAGTTCGTTCCAACTACACCAATGTCTTTTATCGGGAATCAACTAATATACCTAGAGCTTGCCCACCGAGTCGATGAGGCTCTTGGATTCATGACTGCTGCTGGAATCACTAAGGACCCTCCTATTATGAAAACAACTGAATTCTGGACTTCTCATGAATGTTTGTTATTGCCATATGAACAATCACTCACTAGGTTGGATTCAACTTCTGGTCTCTACTATGATTGCTCTGCCCATATGCTTTGGGTTGGGGAACGGACCCGGCAGCTGGATGGTGCTCATGTTGAGTTTCTAAGAGGAGTTGCTAACCCCCTTGGAATTAAGGTAAGTGATAAGATGGATCCAAATGAGCTTGTTAGACTCATTGAGATCTTGAATCCCCGAAATAAACCAGGGAGAATAACTGTGATCACGAGGATGGGAGCTGAAAATGTGAGGATAAAACTTCCACATTTAATCAGGGAAGTACGCAGAGCCGGACAAATTGTCACGTGGGTCAGTGATCCTATGCATGGAAACACCATTAAGGCTCCATGTGGACTCAAAACTCGCCCCTTTGATGCCATCAGGGCTGAGTTGAGAGCATTCTTTGATGTGCATGAACATGAAGGAAGCCATGCAGGTGGGATTCATCTAGAGATGACAGGTCAGAATGTGACTGAGTGCATTGGTGGGTCGAATTCGGTCACGTTTGATGACCTGAGCTCACGTTACCACACACACTGTGACCCCAGGCTCAATGCTTCACAATCTCTTGAGCTTGCTTTCATCATTGCTGAACGGCTGAGAAAGAGTAGGATCAAATCTGGGCACTCTCTTTCCCTTTAG 1578 0.4715 MTVTTSNSFIPTKSLTSLTHSLFPSSKSNQASFLIKPNPVPYIQAVHAAGEPSTPSTTTATRHAKWAIDSWKFKKALQLPEYPNKEAHNSVLKTLEAFPPIVFAGEAKNLQKRLREAALGNAFILQGGDCADSFKEFNAINIRDTFRILLQMSVVMMLGEWRVSLRSRDRINSRRRMNGVKLPSYRGDNVNGDAFDEKARIPDPERMIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTQHAQQGDKFVPTTPMSFIGNQLIYLELAHRVDEALGFMTAAGITKDPPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVRLIEILNPRNKPGRITVITRMGAENVRIKLPHLIREVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAELRAFFDVHEHEGSHAGGIHLEMTGQNVTECIGGSNSVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKSRIKSGHSLSL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0476 525 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 2, CHLOROPLASTIC 33 524 - -
Lal21g0476 525 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 33 524 IPR002480 GO:0003849|GO:0009073
Lal21g0476 525 SUPERFAMILY Aldolase 55 513 - -
Lal21g0476 525 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 66 515 IPR002480 GO:0003849|GO:0009073
Lal21g0476 525 Pfam Class-II DAHP synthetase family 66 509 IPR002480 GO:0003849|GO:0009073
Lal21g0476 525 Gene3D Aldolase class I 99 270 IPR013785 -
Lal21g0476 525 Gene3D Aldolase class I 271 514 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0476 Lal-Chr21 3383305 3386935 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0476 K01626 - gmx:100797019 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0476 21 3383305 3386935 Lal21g0476 21 3383305 3386935 ECH
Lal18g1160 18 14481073 14485188 Lal21g0476 21 3383305 3386935 PCT
Lal22g0437 22 2835808 2839611 Lal21g0476 21 3383305 3386935 PCT
Lal6g0465 6 2944168 2948647 Lal21g0476 21 3383305 3386935 PCT
Lal21g0476 21 3383305 3386935 Lal18g1160 18 14481073 14485188 PCT
Lal21g0476 21 3383305 3386935 Lal22g0437 22 2835808 2839611 PCT
Lal21g0476 21 3383305 3386935 Lal6g0465 6 2944168 2948647 PCT