Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0437 ATGGCTATATCCACCGCTAACTCTCTCATTCCCACCAAATCCTTACTCTCTAACCAACCACCTTATTCCTTCCTCACCAACCCTACCAGGCCCGGGTCCAAGCCCAAGCCTTATATTCTTGCTGTTCACGCTTCCAACAACCCCGTCGTTTCACTCAAACCATCATCTTCTTCCGTTGCCACCACAAATGTGGGACAAGGGAAGTGGTCCGTGGACAGCTGGAAATCCAAGAAGGCACTCCAGCTTCCCGAATATCCGAGCCTGGAGGAGCTTGACGCGGTCCTCCAAACCCTGGATACGTTCCCACCTATTGTCTTTGCGGGCGAGGCAAGGACATTGGAGGAACGTCTAGGTGATGCTGCTATGGGAAATGCCTTCCTTTTGCAAGGTGGAGATTGCGCCGAGAGTTTCAAAGAGTTCAATGCCAATAATATCCGTGATACCTTCAGAATTATTCTTCAGATGGGTGTTGTCATGATGTTCGGTGGCCAAATGCCTGTTATCAAGGTGGGAAGAATGGCGGGTCAGTTTGCGAAGCCGAGATCGGATGGGTTTGAAGAGAAGAACGGTGTGAAGCTGCCGAGTTACAGAGGGGATAACATAAATGGGGATGCTTTTGATGAGAAGTCAAGGATTCCTGATCCACAGAGGATGATTAGAGCTTATTGTCAAGCTGCAGCTACTTTGAATCTCCTCAGATCTTTTGCCACAGGAGGGTATGCTGCTATGCAGAGGGTTACTCAGTGGAATTTAGACTTCACAGACCATAGCGAGCAAGGCGATAGGTACCGAGAGCTTGCTCGCCGAGTCGATGAGGCCCTTGGATTCATGGCTGCTGCTGGACTCACTGTGGATCATCCTATAATGAAAACAACTGAATTCTGGACTTCTCATGAATGCTTGTTATTACCATATGAACAATCACTCACTAGGCTGGATTCAACCTCGGGTCTCTACTATGACTGCTCTGCCCATATGCTTTGGGTTGGTGAAAGAACCAGGCAGCTGGATGGTGCTCATGTTGAGTTTCTAAGAGGAGTTGCTAATCCCCTGGGAATTAAGGTAAGTGATAAGATGGATCCAAATGAACTTGTTAAACTCATCGAGATCTTGAATCCCCAAAACAAAGCGGGGAGAATAACTATAATTACAAGGATGGGAGCTGAAAACATGAGAGTTAAGCTTCCACATCTAATCAGGGCAGTGCGAGGAGCAGGGCAAATTGTAGCATGGGTTAGCGATCCTATGCATGGTAACACCATCAAAGCTCCATGTGGTCTCAAAACACGCCCGTTTGATGCCATCAGGGCTGAGGTGAGAGCATTCTTCGACGTGCATGAACAAGAAGGAAGCCACCCAGGAGGAGTTCACCTAGAGATGACAGGTCAGAATGTGACCGAGTGCATTGGTGGGTCAAGGACGGTTACATTTGATGACCTTGGCTCACGTTATCACACACACTGTGACCCCAGGCTCAATGCTTCTCAAGCTCTTGAGCTTGCTTTCATCATTGCTGAACGGCTCAGAAAGACTAGGATCAGATCCCAGCAGTCTCTTGGCTCTATAGGACATTAA 1575 0.4819 MAISTANSLIPTKSLLSNQPPYSFLTNPTRPGSKPKPYILAVHASNNPVVSLKPSSSSVATTNVGQGKWSVDSWKSKKALQLPEYPSLEELDAVLQTLDTFPPIVFAGEARTLEERLGDAAMGNAFLLQGGDCAESFKEFNANNIRDTFRIILQMGVVMMFGGQMPVIKVGRMAGQFAKPRSDGFEEKNGVKLPSYRGDNINGDAFDEKSRIPDPQRMIRAYCQAAATLNLLRSFATGGYAAMQRVTQWNLDFTDHSEQGDRYRELARRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIRAVRGAGQIVAWVSDPMHGNTIKAPCGLKTRPFDAIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLGSRYHTHCDPRLNASQALELAFIIAERLRKTRIRSQQSLGSIGH 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0437 524 Pfam Class-II DAHP synthetase family 69 505 IPR002480 GO:0003849|GO:0009073
Lal22g0437 524 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 4 520 IPR002480 GO:0003849|GO:0009073
Lal22g0437 524 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 69 511 IPR002480 GO:0003849|GO:0009073
Lal22g0437 524 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 4 520 - -
Lal22g0437 524 SUPERFAMILY Aldolase 65 509 - -
Lal22g0437 524 Gene3D Aldolase class I 253 510 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0437 Lal-Chr22 2835808 2839611 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0437 K01626 - gmx:100797019 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0437 22 2835808 2839611 Lal22g0437 22 2835808 2839611 ECH
Lal18g1160 18 14481073 14485188 Lal22g0437 22 2835808 2839611 LSH
Lal22g0437 22 2835808 2839611 Lal6g0465 6 2944168 2948647 LSH
Lal22g0437 22 2835808 2839611 Lal21g0476 21 3383305 3386935 PCT
Lal21g0476 21 3383305 3386935 Lal22g0437 22 2835808 2839611 PCT