Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1160 ATGTCTATCTCCACCGCTAACTCTTTCATTCTCACCAAATCCTTATTCTCTCCCACCCAACTCAACCAATCACCTTCTTCTTCTTCTTCTTCCCTTCTTTCCAACCCCACCAGGCCCAAGCCCAAATCTTCTATTCTAGCAGTTCATGCCGCCGAGCCCGCCAAGAACCCCGTCGTTTCTGAAAAGCCCATCAAGCCATCGTCTTCTTCCTCTTCCGTTTCCACCAGAAATGTGGGACAAGTGAAGTGGGCCATTGACAGCTGGAAATCTAAGAAGGCTCTTCAGCTTCCTGAATACCCGAGTCAGGAGGATCTTGACTCTGTACTCCGAACCCTTGATGCGTTTCCACCTATCGTCTTCGCCGGTGAGGCGAGGACGTTGGAGGACCGTCTTGGCGACGCTGCAATGGGAAATGCTTTTCTTTTGCAAGGTGGAGATTGCGCTGAGAGCTTCAAGGAGTTTAATGCCAATAACATTCGTGATACCTTTAGAATCATTCTTCAGATGGGTGTTGTTATGATGTTTGGTGGTCAAATGCCAGTTATCAAGGTGGGAAGAATGGCGGGTCAGTTTGCGAAGCCGAGATCTGATGGATTTGAGGAGAAGGACGGTGTGAAGCTGCCGAGTTACAGAGGGGATAACATAAATGGAGATGCTTTTGATGAGAAATCGAGAATTCCGGATCCTCAGAGGATGATTCGGGCTTATTGTCAAGCGGCAGCTACTCTCAATCTCCTGAGGTCTTTTGCCACAGGAGGGTATGCTGCTATGCAGAGGGTTACTCAGTGGAATTTGGACTTCACAGATCACAGCGAGCAAGGAGACAGGTACCGAGAGCTTGCTCACCGAGTCGATGAGGCCCTTGGATTCATGGGTGCTGCTGGACTCACGGTGGACCATCCCATTATGAAAACAACTGAATTCTGGACTTCTCATGAATGCTTGTTATTGCCATTTGAACAATCACTCACTAGGCTGGACTCAACATCCGGTCTCTACTATGATTGCTCTGCCCATATGCTCTGGGTTGGTGAACGGACCAGGCAGCTAGATGGTGCCCATGTTGAGTTTCTAAGAGGAGTTGCTAATCCCCTGGGAATTAAGGTAAGTGATAAGATGGATCCAAATGAGCTTGTTAAACTCATAGAGATCTTGAACCCTCAAAATAAAGCAGGGAGAATAACTATAATTACGAGGATGGGAGCTGAAAACATGAGAGTGAAGCTTCCACATCTAATCAGGGCAGTGCGTAGAGCAGGGCAAATTGTCACATGGGTCAGTGATCCTATGCATGGAAACACCATCAAAGCTCCATGTGGTCTCAAAACACGCCCCTTCGATGCCATAATGGCTGAGGTGAGAGCATTCTTCGATGTGCATGAGCAAGAAGGAAGCCACCCAGGAGGAGTTCACCTAGAGATGACGGGCCAGAATGTGACTGAGTGCATCGGTGGATCAAGGACGGTGACCTTTGATGACCTGAGCTCACGTTATCACACACACTGTGACCCCAGGCTCAATGCTTCTCAAGCTCTTGAGCTTGCTTTCATCATCGCCGAACGGCTCAGGAAGACTAGGATCAGATCGCAGAAGTCTCTTGGCTCTACAGGACTGTAA 1617 0.4861 MSISTANSFILTKSLFSPTQLNQSPSSSSSSLLSNPTRPKPKSSILAVHAAEPAKNPVVSEKPIKPSSSSSSVSTRNVGQVKWAIDSWKSKKALQLPEYPSQEDLDSVLRTLDAFPPIVFAGEARTLEDRLGDAAMGNAFLLQGGDCAESFKEFNANNIRDTFRIILQMGVVMMFGGQMPVIKVGRMAGQFAKPRSDGFEEKDGVKLPSYRGDNINGDAFDEKSRIPDPQRMIRAYCQAAATLNLLRSFATGGYAAMQRVTQWNLDFTDHSEQGDRYRELAHRVDEALGFMGAAGLTVDHPIMKTTEFWTSHECLLLPFEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIMAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQALELAFIIAERLRKTRIRSQKSLGSTGL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1160 538 Pfam Class-II DAHP synthetase family 83 519 IPR002480 GO:0003849|GO:0009073
Lal18g1160 538 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 4 533 IPR002480 GO:0003849|GO:0009073
Lal18g1160 538 SUPERFAMILY Aldolase 76 523 - -
Lal18g1160 538 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 4 533 - -
Lal18g1160 538 MobiDBLite consensus disorder prediction 18 41 - -
Lal18g1160 538 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 83 525 IPR002480 GO:0003849|GO:0009073
Lal18g1160 538 MobiDBLite consensus disorder prediction 18 74 - -
Lal18g1160 538 Gene3D Aldolase class I 273 524 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1160 Lal-Chr18 14481073 14485188 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1160 K01626 - gmx:100797019 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1160 18 14481073 14485188 Lal18g1160 18 14481073 14485188 ECH
Lal18g1160 18 14481073 14485188 Lal22g0437 22 2835808 2839611 LSH
Lal18g1160 18 14481073 14485188 Lal6g0465 6 2944168 2948647 LSH
Lal18g1160 18 14481073 14485188 Lal21g0476 21 3383305 3386935 PCT
Lal21g0476 21 3383305 3386935 Lal18g1160 18 14481073 14485188 PCT