Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0213 ATGGTTTCAGTTGATAATGGGGATTCCAAAGAAGAAATTGAGGAATCTAATGGAACTAAGCTACAGGAGTTTGTTTCCATTGATATTTCATCTTCAAGAAAAACATCGCCGATCAATGAAAATCCTCAGGGAAAGTTCCAGGGAACCTCGAGTTCTGTTCCTAATAGGATCAAGTTCTTTAAATTTGGTTCTGCATCTGAAAAATTCAAGCGCCTTGCCACTGCGAAGGACCAAATTTCACAGATGGTCCCTTCTAGTGGTTCATTAAAAGAGCGCTTAGCTAAGAAACTTAACTGGGATTCGCTTAAGAAGATGTGCATGAAATGGATTCGGGACCCATCGAACATAGCCCTTTTTGCGTGGATTTTATGTGTTGCTGTTTCAGGTGCAATTCTGTTCCTTGTCATGACTGGCATGTTGAATAATGTACTTCGAAATAAGTCCACTAGGAATGCGTGGTTTGAAGTAAACAACCAAATACTCAATGCACTCTTTACCCTTATGTGTTTGTACCAGCATCCAAAGAGGATCTACCACCTTGTACTTTTGTGCAGATGGAATCCAGATGATATCTCTAGACTTAGAAAGTTGTATTGCAAGAATGGAACATATAAGCCCCATGAGTGGGCACACATGATGGTTGTAGTTATTCTCCTTAATGTGAATTGCTTTGCTCAATATGCACTGTGTGGTCTAAACTGGGGTTATAAAAGATCTGTCCGTCCTCCCATAGGAGTTGGAATATGCATAGCTTTTGCAATTGGTGCACCTGCAGTTGCAGGTTTATATACCATCATTAGTCCCCTTGGTAAAGATTATGATTCTGATATGAATGAAGAAGCTCAGATTCAAATTTCCGAGGTTCAAAAGGAAGAGCGTCTGAGAGTGAAGTCATTTGAGACAAGATATTCCTTTGCACTAAAAGATCGAGAAAGGGTTGTTGAGAGTAGACCACAGTGGAGTGGAGGAACACTCGACCTTTGGGATGATATTTCTCAAGCATACCTATCACTTTTCTGCACTTTTTGTGTGTTCGGCTGGAACATGGAAAGACTTGGCTTTGGAAACATGTACGTTCATATTGCCACTTTTATGCTATTCTGCATGGCTCCCTTTTGGATTTTCATCTTGGCTGCTGTTAATATTGAGGATGACACTGTTAGGCAAGCTCTAGTGGGTGCTGGGATTATCCTATGTTTCTTTGGTTTACTCTATGGTGGCTTTTGGAGGATCCAAATGAGAAAGAGGTTCAATTTGCCTGCTTATAACTTCTGTTTTGGTAAACCTGCAGCTTCTGATTGCACACTGTGGCTATGCTGTTGCTGGTGCTCTCTTGCTCAAGAAGTAAGGACAGGGAATACCTATGATATCATAGAAGACAAATTTTTCAGGAAAGAAAATGATACCAGTGGTGACAAACTACTAATTTCGCCTTTGCCTCGCGAAGATGTTGCATCAAACAAATCTACCTCAACTTCTCCTTTGGGTAGCAACTCAGCTTCTATGATCAAACCATCTAGTCCCCTAAGTTCAAGGGGATATGATAGTCAGGGTACACCACTATCTACTGTCAAAGAAGATAAGTCAGAAAGAGGTGAAGATGAAATAATGAAGCCACCAATTCCACCATTAATACATAGAGAATCTCTTTAG 1653 0.4053 MVSVDNGDSKEEIEESNGTKLQEFVSIDISSSRKTSPINENPQGKFQGTSSSVPNRIKFFKFGSASEKFKRLATAKDQISQMVPSSGSLKERLAKKLNWDSLKKMCMKWIRDPSNIALFAWILCVAVSGAILFLVMTGMLNNVLRNKSTRNAWFEVNNQILNALFTLMCLYQHPKRIYHLVLLCRWNPDDISRLRKLYCKNGTYKPHEWAHMMVVVILLNVNCFAQYALCGLNWGYKRSVRPPIGVGICIAFAIGAPAVAGLYTIISPLGKDYDSDMNEEAQIQISEVQKEERLRVKSFETRYSFALKDRERVVESRPQWSGGTLDLWDDISQAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFILAAVNIEDDTVRQALVGAGIILCFFGLLYGGFWRIQMRKRFNLPAYNFCFGKPAASDCTLWLCCCWCSLAQEVRTGNTYDIIEDKFFRKENDTSGDKLLISPLPREDVASNKSTSTSPLGSNSASMIKPSSPLSSRGYDSQGTPLSTVKEDKSERGEDEIMKPPIPPLIHRESL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0213 550 MobiDBLite consensus disorder prediction 483 550 - -
Lal6g0213 550 Pfam Protein of unknown function (DUF2985) 108 186 IPR021369 -
Lal6g0213 550 MobiDBLite consensus disorder prediction 1 52 - -
Lal6g0213 550 MobiDBLite consensus disorder prediction 483 523 - -
Lal6g0213 550 MobiDBLite consensus disorder prediction 524 550 - -
Lal6g0213 550 Pfam PLAC8 family 320 450 IPR006461 -
Lal6g0213 550 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 319 451 IPR006461 -
Lal6g0213 550 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 546 - -
Lal6g0213 550 MobiDBLite consensus disorder prediction 19 52 - -
Lal6g0213 550 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0213 Lal-Chr6 1432415 1434067 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0213 - - gmx:100795088 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0213 6 1432415 1434067 Lal18g1400 18 16223248 16225865 ECH
Lal6g0213 6 1432415 1434067 Lal6g0213 6 1432415 1434067 ECH
Lal18g1400 18 16223248 16225865 Lal6g0213 6 1432415 1434067 LSH
Lal22g0203 22 1264393 1266045 Lal6g0213 6 1432415 1434067 LSH
Lal21g1272 21 15951943 15954271 Lal6g0213 6 1432415 1434067 PCT
Lal18g1400 18 16223248 16225865 Lal6g0213 6 1432415 1434067 PCT
Lal6g0213 6 1432415 1434067 Lal21g1272 21 15951943 15954271 PCT
Lal6g0213 6 1432415 1434067 Lal18g1400 18 16223248 16225865 PCT