Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0203 ATGGGTTCAGTTGATAATGGGGATTCCAAAGAAGAAATTGAGGAATCTAATGGAAGTAAAGTACATGAGTTTGATACCATAGGTGTTTCAACTTTGAGAAAAACATCACCAAGCAGTGAAAATCTTCAGGGAAAGTTCCAGGAAAACATGAGTTCTATTCCTAATAGAATCAAGTTCTTTAATTTTGGCTTTGCTTCTGCCAAATTCAAGCGCCGTGCTACTGTGAAGGACCAAATTTTACAGTTGTCCCTTTCTAGTGGTTCATTAAGAGAGTGCTTAGCTAAGAAACTTAACTGGGGTTTGCTCAAGAAGATGTGCATGAAATGGATTAGGGACCCGGTGAACATGGCGCTTTTAGCATGGATCTTATGTGTTGCTGTTTCGGGTGCAATTCTGTTCCTTGTCATGACTGGCATGTTGAATGCTGTGCTGCCAAATAAATCCACAAGGAATGTGTGGTTTGAAGTGAACAACCAAATACTCAATGCATTGTTTACCCTTATGTGTTTGTACCATCATCCTAAGAGGATATACCACCTAGTACTTTTATCTAGATGGAACCCAGAAGATACCTCTAGACTTAGAAAGGTGTACTGCAAGAATGGAACATATAAGCCCCGAGACTGGGCACACATGCTGGTTGTAGTTATTCTCCTTAATGTGAATTGTTTTGCTCAATATGCACTCTGTGGTCTAAACTGGGGTTATAAAAGATCTGTACGCCCTCCCATAGGAGTTGGAGTATGCATAGCTTTTGCATTTGGTGCACCCACAGTCGCAGGTTTGTATACCATCATTAGCCCCCTTGGTAAAGAATATGATTCTGATATGGATGAAGAAGCGCAGGTTCAAATTTCCGATGCTCAAAAGAAAGAGCAGCTGAGAGTGAAGTCATTTGAGAGGAGATATTCATTTGCACAAAGAGATCAACAAAGGGTTGTTGAAAGTAAACCACAATGGAGTGGAGGAGTACTTGACCTTTGGGATGATATTTCTCAAGCATACCTATCACTTTTCTGCACTTTTTGTGTTTTTGGTTGGAACATAGAGAGACTTGGATTCGGAAACATGTATGTTCATATTGCGACCTTTATGCTATTCTGCATGGCTCCCTTTTGGATTTTTATCTTGACTGCTGTTAATATTGAGGATGACACTGTTAGGCTGGCTCTAGTAGGTGCTGGGATTGTCCTATGTTTCCTTGGTTTATTGTATGGTGGCTTTTGGAGGATCCAAATAAGAAAGAGGTTCAATTTGCCCGCATATAACTTCTGTTTTGGTAAGCCTGCAGCTTCTGATTGCACACTTTGGCTATGCTGTTGCTTGTGCTCTCTTGCTCAAGAAGTGAGGACCAGGAATACATATGATATCATAGAAGATGAGTTTTGCAGGAAAGAAAATGATACTGGCAGTGACAAACTACAAATTTCACCTTTGCCTCGGGTAGATATTGAATCTAACAAACCTGGCTTAAGTTCTCCTTTGGGTAGCAACTTCCCTTCTATTACAAAATCATCTAGTCCTGTAAGTTCAAAGGGATATATCAGTCCGGGTACGGCACTATCTACTGTCAAAGAAGATAATCCAGAAAGAGGTGAAGATGGAATAATGAAGCCACCAACTCCACCTTTAATACACAGAGAATCTCTTTAG 1653 0.4041 MGSVDNGDSKEEIEESNGSKVHEFDTIGVSTLRKTSPSSENLQGKFQENMSSIPNRIKFFNFGFASAKFKRRATVKDQILQLSLSSGSLRECLAKKLNWGLLKKMCMKWIRDPVNMALLAWILCVAVSGAILFLVMTGMLNAVLPNKSTRNVWFEVNNQILNALFTLMCLYHHPKRIYHLVLLSRWNPEDTSRLRKVYCKNGTYKPRDWAHMLVVVILLNVNCFAQYALCGLNWGYKRSVRPPIGVGVCIAFAFGAPTVAGLYTIISPLGKEYDSDMDEEAQVQISDAQKKEQLRVKSFERRYSFAQRDQQRVVESKPQWSGGVLDLWDDISQAYLSLFCTFCVFGWNIERLGFGNMYVHIATFMLFCMAPFWIFILTAVNIEDDTVRLALVGAGIVLCFLGLLYGGFWRIQIRKRFNLPAYNFCFGKPAASDCTLWLCCCLCSLAQEVRTRNTYDIIEDEFCRKENDTGSDKLQISPLPRVDIESNKPGLSSPLGSNFPSITKSSSPVSSKGYISPGTALSTVKEDNPERGEDGIMKPPTPPLIHRESL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0203 550 Pfam Protein of unknown function (DUF2985) 108 186 IPR021369 -
Lal22g0203 550 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 546 - -
Lal22g0203 550 MobiDBLite consensus disorder prediction 490 523 - -
Lal22g0203 550 Pfam PLAC8 family 320 450 IPR006461 -
Lal22g0203 550 MobiDBLite consensus disorder prediction 7 21 - -
Lal22g0203 550 MobiDBLite consensus disorder prediction 1 22 - -
Lal22g0203 550 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 319 451 IPR006461 -
Lal22g0203 550 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 546 - -
Lal22g0203 550 MobiDBLite consensus disorder prediction 468 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0203 Lal-Chr22 1264393 1266045 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0203 - - gmx:100795088 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0203 22 1264393 1266045 Lal22g0203 22 1264393 1266045 ECH
Lal18g1400 18 16223248 16225865 Lal22g0203 22 1264393 1266045 LSH
Lal22g0203 22 1264393 1266045 Lal6g0213 6 1432415 1434067 LSH
Lal21g1272 21 15951943 15954271 Lal22g0203 22 1264393 1266045 PCT
Lal18g1400 18 16223248 16225865 Lal22g0203 22 1264393 1266045 PCT
Lal22g0203 22 1264393 1266045 Lal21g1272 21 15951943 15954271 PCT
Lal22g0203 22 1264393 1266045 Lal18g1400 18 16223248 16225865 PCT