Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1272 ATGGTACCACTGTTCGAGAAAATGGTTTCGGTTGATAACCGGATCGGAAACCTCGAAGATGAAATTGAGGAATGTAATAATGGAAGTAAAGTAAATGAGTTTGCTTCTGTTGATATTTCAACTTCCAGGAAAACATTCATGAGTTGTGAAAATCCTGAGAGGAAATTTCAGGGCACCTCGAATTCTCTTCCGAATAGGATCAACCTGATTAAGTTTGATTCACCATCGGCCAATTTCATGCGGATTGCTACCGAGAAAGACAAGATTTCACAATCCGTGCCTTCTCGTAGTCCTCAGCCGCATTGCCTAAAAGAAAGCTTCAGTGGCATGTTTGGTGAGAAACTTGATTGGAGAACAGTGAAGAAGATGGGTATGGAATGGTTTAGAAACCCAATCAACATTGCCCTTTTTGCGTGGATCCTTTGTGTTGCTGTTTCGGGTGCAATTCTGTTCCTTGTCATGACAGGGATGCTGAACTCGGTGCTACCGATAAAGTCTGTTAGGAACACATGGTTTGAAGTAAACAACCAAATACTCAATGCATTGTTTACACTTATGTGTTTGTACCAACATCCGAAGAGGTTCCATCACCTTGTTCTTCTGTGTCGATGGAGACCAAGCGACATTTCTACACTCCGAAAGTTATACTGCAAGAATGGTACTTATAAGCCGCACGAGTGGACACACATGATGGTAGTGGTTATGCTTCTTCATCTGAATTGTTTTTCTCAATATGCACTTTGTGGTTTAAACTTGGGATATAAAAGATCGGATAGGCCCGCTGTAGGAGTTGGAATATGTATATCTATCGCGATTGCCGCGCCTGCAGTTGCTGGTTTATACACCATTCTTTGCCCGCTTGGAAAGGACTACGATTGCGAGATGGATGAAGAAGCACAGGTTCAAATTACTGCAGCTCAAATGCAAGAGCCGAGACAGAAACCATTTAAGATGAAATATTCATTCGCATCGAAAGATCAACGACAAGTTATTGAAAATAGACCAAAGTGGAGTGGAGGAATACTAGACATTTGGGAAGATATTTCTTTAGCATATCTCTCACTTTTCTGCACTTTTTGTGTCTTTGGGTGGAACATGGAGAGACTTGGCTTTGGAAACATGTATGTTCATATTGCAACTTTCATGCTATTTTGTGTGGCTCCTTTCTGGATTTTTGTATTGGCTGCTGTTAATATCGACGACGACGATGTTAGACAGCCTCTAGTAGCTGTTGGAATTCTTCTTTGTTTTTTCGGCTTACTTTATGGCGGCTTTTGGAGGATCCTAATGAGAAAGAGGTTCAATTTGCCTGCTTATAACTTCTGTTTTGGTAAACCTTCAGTTTCTGATTGCACACTTTGGCTGTGTTGTTGCTGGTGCTCTCTTGCTCAAGAAGCGCGCACCGCGGATCACTACGATCTTGTACAACAAAAACTATGCAGCAAAGATCCTGACCAACCGTCGATTCGACCTTTGGCTCGGGAACATTTTGTGTCAACCAAATCCGGCACAAGTTCGGATAGGCCATTAGCTACTTTAGAAGAAGAACATTCTCAAAGTGGTAAAGATGGAATAATGAATCCACCTATTCCATCATTAATACAAAGAGAAGCTCCTTAG 1620 0.4167 MVPLFEKMVSVDNRIGNLEDEIEECNNGSKVNEFASVDISTSRKTFMSCENPERKFQGTSNSLPNRINLIKFDSPSANFMRIATEKDKISQSVPSRSPQPHCLKESFSGMFGEKLDWRTVKKMGMEWFRNPINIALFAWILCVAVSGAILFLVMTGMLNSVLPIKSVRNTWFEVNNQILNALFTLMCLYQHPKRFHHLVLLCRWRPSDISTLRKLYCKNGTYKPHEWTHMMVVVMLLHLNCFSQYALCGLNLGYKRSDRPAVGVGICISIAIAAPAVAGLYTILCPLGKDYDCEMDEEAQVQITAAQMQEPRQKPFKMKYSFASKDQRQVIENRPKWSGGILDIWEDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCVAPFWIFVLAAVNIDDDDVRQPLVAVGILLCFFGLLYGGFWRILMRKRFNLPAYNFCFGKPSVSDCTLWLCCCWCSLAQEARTADHYDLVQQKLCSKDPDQPSIRPLAREHFVSTKSGTSSDRPLATLEEEHSQSGKDGIMNPPIPSLIQREAP 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1272 539 Pfam PLAC8 family 337 467 IPR006461 -
Lal21g1272 539 PANTHER PLAC8 FAMILY PROTEIN-RELATED 21 497 - -
Lal21g1272 539 PANTHER - 21 497 - -
Lal21g1272 539 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 336 470 IPR006461 -
Lal21g1272 539 MobiDBLite consensus disorder prediction 494 539 - -
Lal21g1272 539 Pfam Protein of unknown function (DUF2985) 126 204 IPR021369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1272 Lal-Chr21 15951943 15954271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1272 - - gmx:100811964 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1272 21 15951943 15954271 Lal21g1272 21 15951943 15954271 ECH
Lal21g1272 21 15951943 15954271 Lal18g1400 18 16223248 16225865 LSH
Lal21g1272 21 15951943 15954271 Lal18g1400 18 16223248 16225865 PCT
Lal21g1272 21 15951943 15954271 Lal22g0203 22 1264393 1266045 PCT
Lal21g1272 21 15951943 15954271 Lal6g0213 6 1432415 1434067 PCT
Lal18g1400 18 16223248 16225865 Lal21g1272 21 15951943 15954271 PCT
Lal22g0203 22 1264393 1266045 Lal21g1272 21 15951943 15954271 PCT
Lal6g0213 6 1432415 1434067 Lal21g1272 21 15951943 15954271 PCT