Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1509 ATGATCGGAAAGTTGTCGCAAATATTAGTCTTCAGCGGCCGTGCCGCCGCATGGGCCACCCTAGGAAGCTCAAGGACCCCCTTTGACATGAACTTGAAGATGAAATCATCAAAGGGTCTAAAGAGTTATGACCTTGGTGGTGTTGGTCTAGGAATTGTTGTGGCTCTTGATAATAAATCAAGTGAAATTGGGCGTGAAACTTTGCCCAAACATGCGGTTTCTACCACAAAATTGAACCGATCTAGACCAATTCAAGTTCAAAGCATGAAAGACCAACATGGTTTTCATCAAAAGGGTGTGAATGAAATTGATGTTGGAAGCTCAGAAGATTACACGTATGTGACAAAACATGTTGCTAACAGGACCATTACTAGGGTTTACTATGATGGTGGTGAAGATGGAATTGTGAGACATAACAATGTTGGTGTTTTCAGAAGAACCCCACCAACACCAATTATAGTTGAACCTGAACCATCATTTCCCACATCAGATTTTCTCACCTCATGTCACTTATGCAGAAAGAAACTCCATGGCAAAGACATTTACATGTACAGTGTTTCAAATTACGGGCCACATCACATGATGCGACCACAATATTGCGGTTGCGGCGCATTATACCGCAATTGTAGTGTGACACCGAATCACAATGATGTGATTGCAACGGGTCGCAACACAACTGTATCGGACCATAAAGATGGATTTAGTTATCTCTCGCCTAAGCGAAAGGGTTGCGCTCAAGCGATAATAAATAGCTTGCTCCCTGTGGGATTCTCACTCAGAGGAGAGAAAGCATTTTGTAGCAAGGAGTGTCGTTCAAGGCAGATAATGATGGAGGTGTGTGGATCAGATTCTTCAATGTCTGTGGAATTGTCAAATTCACCAAACACAAGGGACCAAATAAAATAA 906 0.4238 MIGKLSQILVFSGRAAAWATLGSSRTPFDMNLKMKSSKGLKSYDLGGVGLGIVVALDNKSSEIGRETLPKHAVSTTKLNRSRPIQVQSMKDQHGFHQKGVNEIDVGSSEDYTYVTKHVANRTITRVYYDGGEDGIVRHNNVGVFRRTPPTPIIVEPEPSFPTSDFLTSCHLCRKKLHGKDIYMYSVSNYGPHHMMRPQYCGCGALYRNCSVTPNHNDVIATGRNTTVSDHKDGFSYLSPKRKGCAQAIINSLLPVGFSLRGEKAFCSKECRSRQIMMEVCGSDSSMSVELSNSPNTRDQIK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1509 301 Pfam zinc-finger of the FCS-type, C2-C2 259 278 IPR007650 -
Lal4g1509 301 Pfam zinc-finger of the FCS-type, C2-C2 159 185 IPR007650 -
Lal4g1509 301 PANTHER DUF581 FAMILY PROTEIN 2 185 - -
Lal4g1509 301 PANTHER DUF581 FAMILY PROTEIN 257 300 - -
Lal4g1509 301 ProSiteProfiles Zinc finger FLZ-type profile. 164 282 IPR007650 -
Lal4g1509 301 PANTHER OS02G0174800 PROTEIN 2 185 IPR044604 -
Lal4g1509 301 PANTHER OS02G0174800 PROTEIN 257 300 IPR044604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1509 Lal-Chr4 19262050 19264362 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1509 - - gmx:100816402 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1509 4 19262050 19264362 Lal4g1509 4 19262050 19264362 ECH
Lal17g1482 17 16260132 16262088 Lal4g1509 4 19262050 19264362 LSH
Lal21g1181 21 14601785 14603699 Lal4g1509 4 19262050 19264362 LSH
Lal19g1185 19 15291762 15293112 Lal4g1509 4 19262050 19264362 PCT
Lal4g1509 4 19262050 19264362 Lal19g1185 19 15291762 15293112 PCT