Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1185 ATGTTGGGTAAGAAAACCCAGCCAATGATCGGAAAGTTATCGGAATTATTGGTCTCCGGTGGTGGCCGCGCGGTGGCACTTTTGGACTACAAAGGAAGCCTACTAGACATGAAGATGCAGTCACCAACAAGAGGCTCAAAAAACTACAACCTTGGTGGTGTTGGTTTAGGAATTGTGGTGGATCTTGATAAACCATGTGAAACTAGTCCAAAATATGCTGTTTGTGTATCTAGTTTGAACCGATCATCAGTTCCAATCCCAGTTCATTCCAATGGGTTTCAAAGGGAAATTGATGTGGAGGATTACACATATGTGACATCTCATGTGCCTAACAAAACCTTCACTAAGGTTTATTTTGATGGTGGTGAAGGTGAAATTAAGAAACATGTCTATAACAACACTAACATCATTAAAGCACCAACAACTTCAATTGAACCTGAGCTATCATTTCCCACCTCAACTTTTCTCAGTTCATGTCATCTATGCAGAAATAAACTCCATGGCAAAGACATATACATGTACAGAGGAGAGAAAGCATTTTGTAGCTCGGAATGTCGATCGAGTCAGATAATGATGGACGAGTGCAAAGAGAAGTGTAGGTCAGAAGCTTCAAGGAGTGTGGAATTGTCAAGCTCACCTTACTCAAGGGAACAAATATTTTCAACTAGAATTCTTGCCCTTTAA 684 0.405 MLGKKTQPMIGKLSELLVSGGGRAVALLDYKGSLLDMKMQSPTRGSKNYNLGGVGLGIVVDLDKPCETSPKYAVCVSSLNRSSVPIPVHSNGFQREIDVEDYTYVTSHVPNKTFTKVYFDGGEGEIKKHVYNNTNIIKAPTTSIEPELSFPTSTFLSSCHLCRNKLHGKDIYMYRGEKAFCSSECRSSQIMMDECKEKCRSEASRSVELSSSPYSREQIFSTRILAL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1185 227 PANTHER OS02G0174800 PROTEIN 1 226 IPR044604 -
Lal19g1185 227 ProSiteProfiles Zinc finger FLZ-type profile. 154 197 IPR007650 -
Lal19g1185 227 Pfam zinc-finger of the FCS-type, C2-C2 150 195 IPR007650 -
Lal19g1185 227 PANTHER FCS-LIKE ZINC FINGER 12 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1185 Lal-Chr19 15291762 15293112 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1185 - - gmx:100816402 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1185 19 15291762 15293112 Lal19g1185 19 15291762 15293112 ECH
Lal19g1185 19 15291762 15293112 Lal17g1482 17 16260132 16262088 PCT
Lal19g1185 19 15291762 15293112 Lal21g1181 21 14601785 14603699 PCT
Lal19g1185 19 15291762 15293112 Lal4g1509 4 19262050 19264362 PCT
Lal17g1482 17 16260132 16262088 Lal19g1185 19 15291762 15293112 PCT
Lal21g1181 21 14601785 14603699 Lal19g1185 19 15291762 15293112 PCT
Lal4g1509 4 19262050 19264362 Lal19g1185 19 15291762 15293112 PCT