Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1181 ATGATTGGAAAATTGTCGGAATTAGTAGTCTCCGGTGGCCGTGCCGCCGCGCTTTTTGACACCATAGGAAGCCCAAGAACCCCTTTGGACATGAACATGAACATGCAATCACCAAAGGGCCTAAAGAGCTATGACCTTGGTGGTGTTGGTCTAGGAATTGTGGTGGCTCTTGATAATAAATCAAGTGAAATTGGGCATGGAATTTTGCCCAAACATGCTATTTGTACATCAAACTTGAAGCAACATGTGTTTTTTCAAAAGATTGTGAATGAAATTGATGTTGGAAGCTCAGAAGATTACACATATGTGACATATCATGTGCCTAACAAAACCATCACTAAGGTTTACTATGATGGTGGTGAAGATGGAATTGTGAGACATAACATAAACAACAACAACAACAACAACAAAGTTGGTGTTTTTAGAAGAACCCCAACAACACCAATTATAGTTGAAGCTGAACCATCATTTCCCACCTCAGATTTTCTCAGATCATGTCACCTATGCAGAAAGAAACTCCATGGCAAAGACATATACATATACAGAGGAGAGAAAGCATTTTGTAGCATGGAGTGTCGTTCAAGGGAGATAATGATGGAGGAGCATAATGAGGTATGTAGATCAAAGGCTTCAAGATCTGTGGATTTATCAACTTCACCATACACAAGGGACCAAATGTTTTCAACAGGAATTATTGCACTTTAG 705 0.3957 MIGKLSELVVSGGRAAALFDTIGSPRTPLDMNMNMQSPKGLKSYDLGGVGLGIVVALDNKSSEIGHGILPKHAICTSNLKQHVFFQKIVNEIDVGSSEDYTYVTYHVPNKTITKVYYDGGEDGIVRHNINNNNNNNKVGVFRRTPTTPIIVEAEPSFPTSDFLRSCHLCRKKLHGKDIYIYRGEKAFCSMECRSREIMMEEHNEVCRSKASRSVDLSTSPYTRDQMFSTGIIAL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1181 234 PANTHER DUF581 FAMILY PROTEIN 2 234 - -
Lal21g1181 234 Pfam zinc-finger of the FCS-type, C2-C2 154 202 IPR007650 -
Lal21g1181 234 PANTHER OS02G0174800 PROTEIN 2 234 IPR044604 -
Lal21g1181 234 ProSiteProfiles Zinc finger FLZ-type profile. 161 204 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1181 Lal-Chr21 14601785 14603699 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1181 - - gmx:100813156 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1181 21 14601785 14603699 Lal21g1181 21 14601785 14603699 ECH
Lal17g1482 17 16260132 16262088 Lal21g1181 21 14601785 14603699 LSH
Lal21g1181 21 14601785 14603699 Lal4g1509 4 19262050 19264362 LSH
Lal19g1185 19 15291762 15293112 Lal21g1181 21 14601785 14603699 PCT
Lal21g1181 21 14601785 14603699 Lal19g1185 19 15291762 15293112 PCT