Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1482 ATGTTAGGGAAGAGATACCGGCCAATGATGGGAAAGTTATCGGAATTATTAGTCTCCGGCAGCCGAGCCACCGCGATTTTCGACACCATAGGAAGCCCAAGAAGCCCATTTGAGATGAAGTTGAAGATGCAATCACCAAAGGGTCTAAAAAGCTATGACCTTGGTGGTGTTGGTCTAGGAATTGTGGTGGCTCTAGATAACAATAAATCATGTGAAATTGGACGTGAAGTTTTGCCAAAACATGCTATTTGTACCTCAAATTTGAACCAATCTAGACCAATCCCGGTTCATACCATAAAAAACCAACATGGGTTTTTTCAAAAAGGTGTGAATGAAATTGATGTTGGAAGCTCAGAAGATTACACATATGTGACATATCATGTTCCAAACAAAACCATCACTAAGGTTTACTATGATGGTGGTGAAAGTGGAATTGTGAGAAATAACATAAACAACAACAAAGTTGGTGTCTTTAGAAAAACCCCACCAACAATAGTTGAAGCTGAATTTCCCACCTCAGATTTTCTCAGTTCATGTCATCTATGCAGAAAGAAACTCCATGGCAAAGACATATACATGTATAGAGGAGAGAAGGCATTTTGTAGCAGTGAGTGTCGTTCAAGGCAAATAATATTGGAAGAACGAAATGAGATGTGTAGATCAGAAGCATCAAGATCTGTGGATATGTCAAGTTCACCATACACAAGGGACCAAATGTTCTCAACTGGGATTATTGCACTTTAG 744 0.3938 MLGKRYRPMMGKLSELLVSGSRATAIFDTIGSPRSPFEMKLKMQSPKGLKSYDLGGVGLGIVVALDNNKSCEIGREVLPKHAICTSNLNQSRPIPVHTIKNQHGFFQKGVNEIDVGSSEDYTYVTYHVPNKTITKVYYDGGESGIVRNNINNNKVGVFRKTPPTIVEAEFPTSDFLSSCHLCRKKLHGKDIYMYRGEKAFCSSECRSRQIILEERNEMCRSEASRSVDMSSSPYTRDQMFSTGIIAL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1482 247 ProSiteProfiles Zinc finger FLZ-type profile. 174 217 IPR007650 -
Lal17g1482 247 PANTHER OS02G0174800 PROTEIN 1 247 IPR044604 -
Lal17g1482 247 PANTHER DUF581 FAMILY PROTEIN 1 247 - -
Lal17g1482 247 Pfam zinc-finger of the FCS-type, C2-C2 168 215 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1482 Lal-Chr17 16260132 16262088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1482 - - gmx:100813156 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1482 17 16260132 16262088 Lal17g1482 17 16260132 16262088 ECH
Lal17g1482 17 16260132 16262088 Lal21g1181 21 14601785 14603699 LSH
Lal17g1482 17 16260132 16262088 Lal4g1509 4 19262050 19264362 LSH
Lal19g1185 19 15291762 15293112 Lal17g1482 17 16260132 16262088 PCT
Lal17g1482 17 16260132 16262088 Lal19g1185 19 15291762 15293112 PCT