Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0254 ATGCAACCCCAGCAAAGCTCAAGAATTGATTTGGCTGAATTGAGAGTGCATATTGTGAAGAAGCTTGGAGCAGATAAGTCAAAGCTGTACTTTTATCACTTGAATAGCTTTCTGAGCCAGAAGCTGAGCAAGACTGAATTTGACAAGCTATGTTTCAGAATACTTGGGAGGGAGAATCTTCCGTTACACAATCATTTCATAAAGGCGATTTTGAAGAATGCCATCCAAGCCAAGACCCCACCACTGATCCTTCCAGGTCCACCGAAGTCTGGAGCACATGCTACAGATATATCTCCTGGTAGAGAAGATGGTCCCGAACAGAGTGTTGGCAGTTTCCAAAACCAGAGTCAAAACCAGCCCATTTGGTCAAATGGGGTTTTGCCGGTGTCTCTGTGTAAGGTACGGTCTGTAATACGTGATCGCAAGCTGAGAGATAGACCAAGCCCTCTTGGACCAAATGAGAAGATTGATTCTGTTTCACATCAATCATTGGGTACAGAAGATAGCGGCAGTAAGGTTGCTATGGAGAATGGAGTTCTTACTCCGTGTGATTATCAGAGACCAGTGCAGCATCTTCAACCTGTTTCTGAGCTACCTGAGAATGAAAAGCTGGATGCGGTGCAGCGACCTGCAAAAAAACCAAGAATACATGGTAAAGGGCCGGCCGAAATGTCAATTGTTGAAGATGGGGAAGAGGTGGATCAGTTGAGCCGCTTGAGTTTCCCTAGAAGTCCCCTGGTTGCGCCACTTGGGATTCCTTATTGCTCAGCAAGTGTGGGTGGGGCCCACAAAGCACTGCCAGTGGGTAGCAATGGTGATTTCGATAGCTTTTCTAACAGTGGTAAGTTGTCTAATACAGATACACTGCATAGGCGCATGGAGCAGATTACCACAGTACAAGGTCTTGGAGGTGTTTCTATGGAATGTGCCAACGTGTTGAATAATATGTTGGATGTTTACTTGAAACGGTTGATCAAGTCTTGTGTTGAATTAGTGGGAGCTAGGTCTACAACTGAGCTGAGAAAGCCGCCTGCCCACAAACTGCAGATTCAGAACAAGGTCATCAACGGCATATGGCCGAGCAATAATCATTTACACTTACAAAGTGCTGGGAGGTTGGCAGGACCTGTGCCTGAACACAAACTGCCGTGCTCGGTTTCATTGCATGATTTCAAAGTTGCCATGGAGCTAAATCCACAGAAACTAGGGGAAGATTGGCCGCTGCTGTTGGAGAAAATTTCCATGCAATCATTTGATCAATAA 1263 0.4568 MQPQQSSRIDLAELRVHIVKKLGADKSKLYFYHLNSFLSQKLSKTEFDKLCFRILGRENLPLHNHFIKAILKNAIQAKTPPLILPGPPKSGAHATDISPGREDGPEQSVGSFQNQSQNQPIWSNGVLPVSLCKVRSVIRDRKLRDRPSPLGPNEKIDSVSHQSLGTEDSGSKVAMENGVLTPCDYQRPVQHLQPVSELPENEKLDAVQRPAKKPRIHGKGPAEMSIVEDGEEVDQLSRLSFPRSPLVAPLGIPYCSASVGGAHKALPVGSNGDFDSFSNSGKLSNTDTLHRRMEQITTVQGLGGVSMECANVLNNMLDVYLKRLIKSCVELVGARSTTELRKPPAHKLQIQNKVINGIWPSNNHLHLQSAGRLAGPVPEHKLPCSVSLHDFKVAMELNPQKLGEDWPLLLEKISMQSFDQ 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0254 420 MobiDBLite consensus disorder prediction 155 169 - -
Lal4g0254 420 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 419 - -
Lal4g0254 420 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 419 IPR024738 GO:0070461
Lal4g0254 420 MobiDBLite consensus disorder prediction 81 117 - -
Lal4g0254 420 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 332 IPR024738 GO:0070461
Lal4g0254 420 MobiDBLite consensus disorder prediction 143 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0254 Lal-Chr4 1642851 1644113 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0254 - - gmx:100819343 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0254 4 1642851 1644113 Lal4g0254 4 1642851 1644113 ECH
Lal17g0272 17 1704959 1706227 Lal4g0254 4 1642851 1644113 LSH
Lal25g1095 25 14260372 14261643 Lal4g0254 4 1642851 1644113 PCT
Lal10g0048 10 588836 590098 Lal4g0254 4 1642851 1644113 PCT
Lal4g0254 4 1642851 1644113 Lal25g1095 25 14260372 14261643 PCT
Lal4g0254 4 1642851 1644113 Lal10g0048 10 588836 590098 PCT