Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0272 ATGCAACCCCAGCAGAGCTCAAGAATTGATTTGGGTGAATTGAGAGCACAGATTGTGAAGAAGCTTGGTGTGGATAAATCAAAGCTGTACTTTTATTACTTGAACAGGTTTCTGAGTCAGAAGCTGAGCAAGACTGAATTTGACAAGTTATGTTTCAGAATACTTGGGAGGGAGAATCTTCCGTTACACAATCATTTCATAAAGGCGATTTTGAAGAATGCCATCCAAGCCAAGACCCCACCACTGATCCAGCCATCAGGTCCACCAAAGTCCAGAGCACATGCTACGGACATATCTCCTGGTAGAGAAGATGGGCATGAGCAGAGTGTTGGCAGCTTCCAAAATCAGAATCAAAGTCAACCCATTTGGTCAAATGGGGTTTTGCTGGTGTCCCCACGTAAGGTGCGGTCTGGAATACGTGATCGGAAGCTGAGAGATAGACCAAGCCCTCTTGGACCAAATGGGAAGGTTGATTCTGTTTCTCATCAGTCCTTGGGTACAGAAGACAACAGTAGCAAGGTTGATATGGAGAATGCAGTTCTCACTCCATGTGATTATCAGAGACCAACACAGTATCTTCAAGCCGTTGCTGAGTTACCTGAGAATGAAAGAGGGGATGCCGATCAGAGGCCTGCAAAAAAACCAAGGATGCATGGCAAAGAAGGGCCAGCTGAAATGTCAATTGTCGAAGATGGGGAAGAAGTGGATCAGTTAAGTCGCCTGAGATTTCCTCGAAGTCCCCTGGTAGCACCGCTTGGGATTCCTTACTGCTCAGCAAGTGTTGGTGGGGCCCGCAAAGCATTGCCGGTGAGTAGCACTGGTGATTTCGGTAGTTGTAATGACAGTGGTAGGTTGTCTGATACAGACACACTGCATAGGCGGATGCTGCAGATTGCCGCAGTACACGGTATTGGAGGTGTTTCGGTGGAATGTGCCAGCATACTGAATAATATGTTGGATGTGTACTTGAAACGGCTGATCAAGTCTTCTGTTGATTTAGTGGGAGCCAGGTTTACAAATGAGCTGAGGAAGCCCCTTGCCCCCAAACAACAGATTCAGAATAAGGTCATCAATGGCATGCGGCTAAGTAATAATCATTTACTCTTGCAAAGGGCTGGAGGGTCGATAGAACCTGTGCCTGAACACAAACCACTGTGCTTGGTTTCCCTGCATGATTTTAAAGTTGCCATGGAGCTAAATCCACAGAAACTTGGAGAAGATTGGCCACTGCTGTTGGAGAAAATTTCCATGCTATCGTTTGAGCAATAA 1269 0.4634 MQPQQSSRIDLGELRAQIVKKLGVDKSKLYFYYLNRFLSQKLSKTEFDKLCFRILGRENLPLHNHFIKAILKNAIQAKTPPLIQPSGPPKSRAHATDISPGREDGHEQSVGSFQNQNQSQPIWSNGVLLVSPRKVRSGIRDRKLRDRPSPLGPNGKVDSVSHQSLGTEDNSSKVDMENAVLTPCDYQRPTQYLQAVAELPENERGDADQRPAKKPRMHGKEGPAEMSIVEDGEEVDQLSRLRFPRSPLVAPLGIPYCSASVGGARKALPVSSTGDFGSCNDSGRLSDTDTLHRRMLQIAAVHGIGGVSVECASILNNMLDVYLKRLIKSSVDLVGARFTNELRKPLAPKQQIQNKVINGMRLSNNHLLLQRAGGSIEPVPEHKPLCLVSLHDFKVAMELNPQKLGEDWPLLLEKISMLSFEQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0272 422 MobiDBLite consensus disorder prediction 197 223 - -
Lal17g0272 422 MobiDBLite consensus disorder prediction 79 118 - -
Lal17g0272 422 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 421 IPR024738 GO:0070461
Lal17g0272 422 MobiDBLite consensus disorder prediction 156 172 - -
Lal17g0272 422 MobiDBLite consensus disorder prediction 201 223 - -
Lal17g0272 422 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 334 IPR024738 GO:0070461
Lal17g0272 422 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 421 - -
Lal17g0272 422 MobiDBLite consensus disorder prediction 138 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0272 Lal-Chr17 1704959 1706227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0272 - - gmx:100819343 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0272 17 1704959 1706227 Lal4g0254 4 1642851 1644113 LSH
Lal25g1095 25 14260372 14261643 Lal17g0272 17 1704959 1706227 PCT
Lal10g0048 10 588836 590098 Lal17g0272 17 1704959 1706227 PCT
Lal17g0272 17 1704959 1706227 Lal25g1095 25 14260372 14261643 PCT
Lal17g0272 17 1704959 1706227 Lal10g0048 10 588836 590098 PCT