Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1095 ATGCAACCGCGGCGGAGCTCAAGAATTGATTTGGATGAATTAAAAGCACATATTGTAAAGAAGCTTGGACCTGATAAGGCAAAGCGGTACTTTTATTATGTGAACCGGTTTCTAAGTCAGAGGATGACCAAGACTGAATTTGTCAAGTCATGTTATCGGGTACTTGGGAGGGAGAACCTTCTGTTACACAATCATTTTATAAGGTCAGTTTTGAAGAATGTCTGCCAAGCCAAGACCCCACCACCACTAGTTCAGCCATCGTGTCCTCTGAAATCTGGAGCACGTGTTACTAACACATCTCCTCGTAGAGAAGATGGATATGAACAGAGTGTCTCTAACTTCCTAAATCAAAACGCTCCTGTTTGGTCAAATGGGGTTTTGCCGGTCTCCCCACGTAAGGCAAGGTCAGGAATGCGTGATCGGAAGCTTAAAGATAGACCAAGCCTTCTTGGACCCAATGGGAAAGTTGATCCGGTTGCTCATCAACCCACACCTATGGAAGACAATAGTGGTAGTAAGATTGACATGGAGAATGGAACTCTTGAACCATGTGATTATCAGAGACCAATACAGCATCTTCAACCAGTAGCTGAGCAGCTGCATGAGAATGAATTGGCGGATGCCGTTCAAAGGCCTACAAAAAGACCAAGAATATATGTTGAAGGGCCAACCGAAATATCGATTATCGAAAATGGCGAAGCGGTGGAGCAATTAAACCACCTCAGTTTCTCTAGAAGTCCCCTGATAGCACCACTTGGGATCCCGTACTGCTCCGCAAGTGTGGGTGGGGCCCACAAAGCAATGCCGGTGAGTAGTAGTAGTAGTAGTGATTATGTTAGTTGTTGTGACTGTGGTAGGTTGTCTGATACTGTTACATTGAGAAGCCGCATGGAGCAGATTGCTATAGTACAGGGTCTTGGAGGTGTTTCTATGGAATGTGCGAATATGTTGAATATCGTGTTGGATGTGTACTTGAAACGGTTGATCAGGTCTTGTGTTGATTTAGTGGCAGCTAGATCTACAAATGAGCCGAGGGAGCCCCCTTTCTCAAAGCAGCAGATTCAGGGTAAGGTCGTCGATGGCATGTGGCCGAATAATCATTTACATGTGCATAGTGCTGTTGAGGCAGAAGAACCTGAGCATGAACACATACCACCACGCTCAGTATCTTTGCACGATTTTAAAGTTGCCATGGAGCTAAATCCACAGCAACTTGGAGAAGATTGGCCACTACTGTTAGAAAAAATTTCCATGCAATCCTTTGAGGAATAA 1272 0.4481 MQPRRSSRIDLDELKAHIVKKLGPDKAKRYFYYVNRFLSQRMTKTEFVKSCYRVLGRENLLLHNHFIRSVLKNVCQAKTPPPLVQPSCPLKSGARVTNTSPRREDGYEQSVSNFLNQNAPVWSNGVLPVSPRKARSGMRDRKLKDRPSLLGPNGKVDPVAHQPTPMEDNSGSKIDMENGTLEPCDYQRPIQHLQPVAEQLHENELADAVQRPTKRPRIYVEGPTEISIIENGEAVEQLNHLSFSRSPLIAPLGIPYCSASVGGAHKAMPVSSSSSSDYVSCCDCGRLSDTVTLRSRMEQIAIVQGLGGVSMECANMLNIVLDVYLKRLIRSCVDLVAARSTNEPREPPFSKQQIQGKVVDGMWPNNHLHVHSAVEAEEPEHEHIPPRSVSLHDFKVAMELNPQQLGEDWPLLLEKISMQSFEE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1095 423 MobiDBLite consensus disorder prediction 126 173 - -
Lal25g1095 423 MobiDBLite consensus disorder prediction 134 148 - -
Lal25g1095 423 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 423 IPR024738 GO:0070461
Lal25g1095 423 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 6 336 IPR024738 GO:0070461
Lal25g1095 423 MobiDBLite consensus disorder prediction 86 106 - -
Lal25g1095 423 MobiDBLite consensus disorder prediction 91 106 - -
Lal25g1095 423 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1095 Lal-Chr25 14260372 14261643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1095 - - gmx:100803746 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1095 25 14260372 14261643 Lal10g0048 10 588836 590098 LSH
Lal25g1095 25 14260372 14261643 Lal17g0272 17 1704959 1706227 PCT
Lal25g1095 25 14260372 14261643 Lal4g0254 4 1642851 1644113 PCT
Lal17g0272 17 1704959 1706227 Lal25g1095 25 14260372 14261643 PCT
Lal4g0254 4 1642851 1644113 Lal25g1095 25 14260372 14261643 PCT