Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0201 ATGCTGTGTAAACTGGTTTCTGTGCCAACAAGGAAGAAGAAACGTGGCACTGTTCCTGTTTACCTCAATGTTTATGATCTCACTCCTATCAATGGCTATGCCTATTGGTTTGGCCTTGGAGTTTATCATTCTGGAGTTCAAGTTCATGATATTGAATATGGATTTGGGGCGCATGAACATGACACAACTGGAATTTTTGAAGTGCAACCGAAAAACTGTCCCGGGTTCACTTTCAGAAAATCAATTTTCATTGGAACAACAGATCTTGGGCAGAAAGAGGCTCAGGCATTTATGGAGAAACTAGCTCAAGACTACTCTGGGAAAACCTATAATCTCATCTCAAAAAACTGCAACCACTTCTGTAATGATGTTTGTCTCAAATTAACAGGAAGGTCAATCCCTCGATGGGTGAATCGACTTGCTCGACTTGGTCTTCTCTGCAACTGTGTTCTTCCCCATGGACTAAATGACACAAAAGTTCGGCAAGTTACATTAGACAAGGTTCAGGAAGGAGAGAAGAGGAAAACAAGAAACCAGTCGAACAAGTATGAACCTTCCTCCGATCCTCCAATGTCGTCTCGCCCTAAAGGTTCTTCATTTAAAACTAGTAGCCAAAGACATTGCCTTTCTCCATCTTCATCATTGATTAATGTTTCTTCAACCTCAACCTTAACAGTTTAG 681 0.4112 MLCKLVSVPTRKKKRGTVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHDIEYGFGAHEHDTTGIFEVQPKNCPGFTFRKSIFIGTTDLGQKEAQAFMEKLAQDYSGKTYNLISKNCNHFCNDVCLKLTGRSIPRWVNRLARLGLLCNCVLPHGLNDTKVRQVTLDKVQEGEKRKTRNQSNKYEPSSDPPMSSRPKGSSFKTSSQRHCLSPSSSLINVSSTSTLTV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0201 226 MobiDBLite consensus disorder prediction 167 181 - -
Lal4g0201 226 Pfam PPPDE putative peptidase domain 19 152 IPR008580 GO:0008233
Lal4g0201 226 SMART DUF862_2a 18 156 IPR008580 GO:0008233
Lal4g0201 226 Gene3D PPPDE domains 13 174 IPR042266 -
Lal4g0201 226 MobiDBLite consensus disorder prediction 167 226 - -
Lal4g0201 226 ProSiteProfiles PPPDE domain profile. 18 155 IPR008580 GO:0008233
Lal4g0201 226 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 224 - -
Lal4g0201 226 PANTHER DESUMOYLATING ISOPEPTIDASE 2 224 IPR008580 GO:0008233
Lal4g0201 226 MobiDBLite consensus disorder prediction 182 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0201 Lal-Chr4 1257729 1259890 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0201 K22763 - gmx:100306675 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0212 17 1302002 1303804 Lal4g0201 4 1257729 1259890 LSH
Lal21g0315 21 2114746 2117448 Lal4g0201 4 1257729 1259890 LSH
Lal10g0029 10 306037 309404 Lal4g0201 4 1257729 1259890 PCT
Lal4g0201 4 1257729 1259890 Lal10g0029 10 306037 309404 PCT