Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0029 ATGTTGTGTCATCGGATACCAATTCATAAGAAGAAAAAACCGGGTTTATTTTCGGTTTATTTGAACGTCTATGATCTTACTCCCATTAATGGTTATGCTTATTGGCTTGGCCTTGGTGTTTATCATTCCGGCGTCCAAGTTCATGATGTGGAGTATGGATTTGGAGCACATCAAAGAAACACAACAGGGATATTTGTAGTGGAACCTAGAAATTGTCCAGGATTCACATTCAGAAAATCAATTTTAATTGGAACTACAAATCTGAACCCAATGGATGTTAGAGTATTGATGGAAAAGCTAGCTGAAGAGTATTCAGGGAACACTTACCACCTTATTGAAAAAAACTGCAATCACTTTTGTAGAGATCTTTGTCTCAAATTAACAGCAAAATCTATACCTCCATGGGTCAATCGACTTGCTAGACTTGGTTTTTTATGCAACTGTGTTCTTCCAAAAAGCCTAAATGAGAAGAAGATTAGTGAAGTTTCATCTGATAGGATAAGGGAAGGAGAAAAGAAGAAAATTAGAAGCAAATCTAGTAGCAGATATGAGATTGCTTCCTCCAATAAACCATTATCTAGTAGCCAAAGAAGACATTGTGTTTCTCCACCTTCTTCTATAATCAATGTTTCTTCAACCACAACCATAGTAGTAAAAAGATGGAAAAGACTTGAAGTGGAAATGGCACCACAAGCACTTGTGCTTGATAAACCTATGAAGTTCGCCATAAAGAATTATCTTTGA 744 0.3629 MLCHRIPIHKKKKPGLFSVYLNVYDLTPINGYAYWLGLGVYHSGVQVHDVEYGFGAHQRNTTGIFVVEPRNCPGFTFRKSILIGTTNLNPMDVRVLMEKLAEEYSGNTYHLIEKNCNHFCRDLCLKLTAKSIPPWVNRLARLGFLCNCVLPKSLNEKKISEVSSDRIREGEKKKIRSKSSSRYEIASSNKPLSSSQRRHCVSPPSSIINVSSTTTIVVKRWKRLEVEMAPQALVLDKPMKFAIKNYL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0029 247 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 3 217 - -
Lal10g0029 247 Pfam PPPDE putative peptidase domain 18 152 IPR008580 GO:0008233
Lal10g0029 247 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Lal10g0029 247 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Lal10g0029 247 MobiDBLite consensus disorder prediction 170 205 - -
Lal10g0029 247 MobiDBLite consensus disorder prediction 181 205 - -
Lal10g0029 247 PANTHER DESUMOYLATING ISOPEPTIDASE 3 217 IPR008580 GO:0008233
Lal10g0029 247 Gene3D PPPDE domains 13 169 IPR042266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0029 Lal-Chr10 306037 309404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0029 K22763 - gmx:100786432 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0029 10 306037 309404 Lal17g0212 17 1302002 1303804 PCT
Lal10g0029 10 306037 309404 Lal21g0315 21 2114746 2117448 PCT
Lal10g0029 10 306037 309404 Lal4g0201 4 1257729 1259890 PCT
Lal17g0212 17 1302002 1303804 Lal10g0029 10 306037 309404 PCT
Lal21g0315 21 2114746 2117448 Lal10g0029 10 306037 309404 PCT
Lal4g0201 4 1257729 1259890 Lal10g0029 10 306037 309404 PCT