Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0212 ATGCTGTGCAAACTGGTAGCGGTGCCACCAAAGAAGAAGCGTGGCACTGTTCCGGTTTACCTCAATGTTTATGATCTCACTCCCATAAATGGCTATGCCTATTGGTTTGGCCTTGGAGTCTATCATTCTGGAGTTCAAGTTCATGGTATTGAATATGGTTTCGGAGCGCATGAACATGACATAAGTGGAATTTTTGAAGTGCAACCAAGACACTGTCCTGGGTTCACTTTCAGAAAATCAATTTTCATCGGAACAACAGATCTGGGACAGAAAGAAGTTCCAGCATTTATGAAGAAACTAGCCCAATACTATTCTGGGAACACCTATCATCTCATCTCAAAAAACTGCAACCACTTTTGCTGTGATGTTTGTCTCAAATTAACGGGAAAGTCAATCCCTCGATGGGTGAATCGACTTGCTCGACTTGGTCTTCTCTGCAATTGTGTTCTTCCCCCTGGGCTAAATGGCACAAAAGTATGTCAAGTTAAATTAAACAAGGTTCAGGAAGGAGATAAGAAGAAAACAAGAAAGCAGTCCAAAAGGTATGAGGCTTCCTCCAATTCTACATTGTCATTGTCTGGCCCTCAAGGTTCATCAATTAAAAATAGTAGCCAAAGACATTGCCTTCTCCCATCTTCATCTTTGATTAATGCTTCTTCAACCTCAACCTTAACAGCAAAGTAA 684 0.4123 MLCKLVAVPPKKKRGTVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGIEYGFGAHEHDISGIFEVQPRHCPGFTFRKSIFIGTTDLGQKEVPAFMKKLAQYYSGNTYHLISKNCNHFCCDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNGTKVCQVKLNKVQEGDKKKTRKQSKRYEASSNSTLSLSGPQGSSIKNSSQRHCLLPSSSLINASSTSTLTAK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0212 227 MobiDBLite consensus disorder prediction 182 206 - -
Lal17g0212 227 Gene3D PPPDE domains 12 173 IPR042266 -
Lal17g0212 227 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Lal17g0212 227 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
Lal17g0212 227 MobiDBLite consensus disorder prediction 170 206 - -
Lal17g0212 227 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Lal17g0212 227 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 225 - -
Lal17g0212 227 PANTHER DESUMOYLATING ISOPEPTIDASE 2 225 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0212 Lal-Chr17 1302002 1303804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0212 K22763 - gmx:100306675 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0212 17 1302002 1303804 Lal21g0315 21 2114746 2117448 LSH
Lal17g0212 17 1302002 1303804 Lal4g0201 4 1257729 1259890 LSH
Lal10g0029 10 306037 309404 Lal17g0212 17 1302002 1303804 PCT
Lal17g0212 17 1302002 1303804 Lal10g0029 10 306037 309404 PCT