Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1423 ATGGCCAAGGAAGCTTATATGTGCCTTTTATTCATCTCTTTTCTCATAATCTTCTGTTCTAGTACTATGGTCGGTTTTTCTAATCATGAGAGGGAACACACTACATCTTCAGTATATACCTTAACCACATTCCTAAAGAAAAACAAGACTCAGATTCAGCTTTTCTGCTTTTTCTGTGCAAAATCTTCCATTTTGTCCAAAAGAGAAAGCCTAAGAAAATTCCATATGAGAAGAATTCTAGATGACACAAATCCAACACCAAAGATCACAGTTCCTTCCACCAATTCTGTCACAGTTTCACCAACAAATCCAACTTCAATACCTGAAACAGTTCCTTCTACCACAACACCTATTCCTTTAAGCCCTACAAACCCAGCAAATTCACAAGTAACAGCTCCTACTTCAGTTCTAGGGACACCACCACCATCTACTACTACTACTACTACTATTCCATCTCCATTAGGAAACACAAATGCACCAAATACTCCTGGACAGTTTTGGTGTGTGGCAAAAAGTGGAGTTCCAGAAAGTACTATTCAAACTGCACTTGATTATTGTTGTGGAATGGATAGTGTTGCATGTTCACAAATACAGCAAGGTGGGAGTTGTTACAATCCTAATTCTTTACAGAACCATGCTTCTGTTGCCTTTAACAGCTACTACCAGAAGAATCCAGCTCCAACAAGCTGTGACTTTGGAGGGGTTGCCACCTTAGTTAACACCAATCCAAGCTCAGGATCTTGCATTTACACATCATCTTCAGGAGCAGCCACATCCAGCTCTAATGGCCCAAGCTCAGTTATTGGATACCAAAGTCCTCCACCAAATGGTGTAGATACCTCACATTCATCTGGTCTGAGACCATTTATTGGCTGCATGGTTATTCTGATATCAATAATCAATACTCCAGCTATGCCATAG 921 0.4017 MAKEAYMCLLFISFLIIFCSSTMVGFSNHEREHTTSSVYTLTTFLKKNKTQIQLFCFFCAKSSILSKRESLRKFHMRRILDDTNPTPKITVPSTNSVTVSPTNPTSIPETVPSTTTPIPLSPTNPANSQVTAPTSVLGTPPPSTTTTTTIPSPLGNTNAPNTPGQFWCVAKSGVPESTIQTALDYCCGMDSVACSQIQQGGSCYNPNSLQNHASVAFNSYYQKNPAPTSCDFGGVATLVNTNPSSGSCIYTSSSGAATSSSNGPSSVIGYQSPPPNGVDTSHSSGLRPFIGCMVILISIINTPAMP 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1423 306 MobiDBLite consensus disorder prediction 86 155 - -
Lal3g1423 306 Gene3D - 162 263 - -
Lal3g1423 306 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 76 283 - -
Lal3g1423 306 SMART X8_cls 166 250 IPR012946 -
Lal3g1423 306 Pfam X8 domain 167 237 IPR012946 -
Lal3g1423 306 MobiDBLite consensus disorder prediction 256 282 - -
Lal3g1423 306 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 76 283 IPR044965 GO:0004553|GO:0005975
Lal3g1423 306 MobiDBLite consensus disorder prediction 85 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1423 Lal-Chr3 20133072 20135644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1423 155 300 Glycoside Hydrolase AT1G66250 33.766 1.22e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1423 - - vun:114194324 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1423 3 20133072 20135644 Lal3g1423 3 20133072 20135644 ECH
Lal3g1423 3 20133072 20135644 Lal18g0386 18 3299487 3302628 LSH
Lal3g1423 3 20133072 20135644 Lal12g0564 12 4039672 4043042 PCT
Lal3g1423 3 20133072 20135644 Lal24g0471 24 3318376 3325479 PCT
Lal12g0564 12 4039672 4043042 Lal3g1423 3 20133072 20135644 PCT
Lal24g0471 24 3318376 3325479 Lal3g1423 3 20133072 20135644 PCT