Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0564 ATGGCCAAGGAATCTTCTTTGTGCTTCTTGTTTCTCTCTTTTCTCATCACTACCAGTGCTGGAACTTTGGTGGGGTTTTCCTCAACTTCTGCTGAAACAATATCATTCCTCCAGCAAAGCAAGGTTTCACTATCTCAGATTAGAGTTTTAGTCACAGATTCTAGGATTTTAGGCACTCTTATCAACTACGACAAGGTCTCAGTTGATTTATACTTAAACAAAAGCTTAGTTGGAAATTTCATTACTTCAAAACCATATGCAGTTTCATGGCTAAAAACTCATGTAGTGAACTTTCTTTCAAAAGTAAACATCAAAAGCATCATTGTTAATTGTGGTAGTGAGTACTTGGTACATAATGAGATACAACCTTCACTTTTATCTGCTCTTAAATCAGTTCATTCAGTTCTCAACAAGCTTCATATAGGCAAGGAAGTAAAAGTCTCAGTAGCATTTCCACTGTTATACTTAGAGAAGTTAAGTACATCACATGAAAAGGAACATCTTGTTAAGATTCTTTCATTTATAAAGGAAACAGAATCCTTTGTCTTGATAGAAGACATCATTGAAGGGGAACTAAGCATTGGGGAACATTTTGTTCAGTCTATTATCAAAAGAGCTACTCTTGCTGCTTCTGTTCTTCCTTGCAAAGATGTTCCTATGGTTCTCACAATCAAGAGCACAGTTATCCCAAGTTCAAAAGAAGTATCTCAATTTAGTGAAAGGGTATCCAAATATCTAGAACCAAGAACACAGATCATAAAGAGAATAGTTGCATTATATGCAGAAGTAAACATAATAGAAGATTTTGCACAGAAACAGCTCAAAAGGGAAGAGGAAGAATTATTTCCTCACATGAGAAGAACTCTATATGACACCACAACAAACCCACCAAACACAATTTTCCCTACAAATCCTACACCAACCATAACACCACCAGATACACCAACCATAATCACAGTCCCTTCTACTACTAATCCTGTTCCAATTTCCCCAACTAATCCAGCTGCAATGCCAGTAACAGTTCCTAACACCACACCTGTGCCTTTAACTCCAACAACTCCAGCCAATAATTCACCAGTACTACCAGTCTCAAATCCAGCAATTTCTGCAACTCCAATACCAGTGCAACCAGTAATAAACCCTGTGGCATCTTATCCTCCCCCACCACCAAGTGTTGTTCCTGTCATAAACCCTCTGCCACCTCCTGCAAATACAAATGCTCCTGCTGTGACTCAGGGACAGAGTTGGTGTGTAGCAAAGAATGGAGCTCCACAAAGTTCTCTTCAATCAGCACTGGACTATGCTTGTGGAAATGGTGCTGATTGTTCTCAGCTACAGCAGGGTGGGAGTTGTTATAGTCCAGTTACTTTGCAGAACCATGCTTCTTATGCTTTCAATAGCTACTATCAAAAGTATCCAGCACCAACTAGCTGTGACTTTGGTGGGGCTGCCTCCTTAGTTAACACCAATCCAAGTTCAGGTTCTTGCATTTTCCCATCATCATCTTCATCAACAACAACAACAACAACGCCACTTCCATCAAATACTATACCGCCACCAAGTCCTATAACTCCTCCAACAATTCCAACAACACCACCAACAGCACCTACAACACCACCAACAGCACCTACAACACCAATTCCTACAGCACCAACAACACCTACAACACCAATTCCTACAGCACCAACAACACCCCCATCTTCAGGAACTAGCACTTTCGGCTATGGTACACCACCATCAGTGTTAAATCCAAGCATCCCAACATCAGGTATAATGCCAGGTTTTCCCCCTGCTGAAAATTCGACATCGTCAACCTCACATTCAGTTAGTCTTCTGAGACCTTCTTTTGGCTGCATGGCACTGATGATGTCATTTGTCACTGCAAGACTCACTATGCAGCCATAG 1905 0.4073 MAKESSLCFLFLSFLITTSAGTLVGFSSTSAETISFLQQSKVSLSQIRVLVTDSRILGTLINYDKVSVDLYLNKSLVGNFITSKPYAVSWLKTHVVNFLSKVNIKSIIVNCGSEYLVHNEIQPSLLSALKSVHSVLNKLHIGKEVKVSVAFPLLYLEKLSTSHEKEHLVKILSFIKETESFVLIEDIIEGELSIGEHFVQSIIKRATLAASVLPCKDVPMVLTIKSTVIPSSKEVSQFSERVSKYLEPRTQIIKRIVALYAEVNIIEDFAQKQLKREEEELFPHMRRTLYDTTTNPPNTIFPTNPTPTITPPDTPTIITVPSTTNPVPISPTNPAAMPVTVPNTTPVPLTPTTPANNSPVLPVSNPAISATPIPVQPVINPVASYPPPPPSVVPVINPLPPPANTNAPAVTQGQSWCVAKNGAPQSSLQSALDYACGNGADCSQLQQGGSCYSPVTLQNHASYAFNSYYQKYPAPTSCDFGGAASLVNTNPSSGSCIFPSSSSSTTTTTTPLPSNTIPPPSPITPPTIPTTPPTAPTTPPTAPTTPIPTAPTTPTTPIPTAPTTPPSSGTSTFGYGTPPSVLNPSIPTSGIMPGFPPAENSTSSTSHSVSLLRPSFGCMALMMSFVTARLTMQP 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0564 634 Gene3D - 409 510 - -
Lal12g0564 634 MobiDBLite consensus disorder prediction 513 564 - -
Lal12g0564 634 Gene3D Glycosidases 21 186 - -
Lal12g0564 634 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 140 511 IPR044965 GO:0004553|GO:0005975
Lal12g0564 634 Pfam X8 domain 416 485 IPR012946 -
Lal12g0564 634 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 140 511 - -
Lal12g0564 634 MobiDBLite consensus disorder prediction 495 570 - -
Lal12g0564 634 MobiDBLite consensus disorder prediction 495 512 - -
Lal12g0564 634 MobiDBLite consensus disorder prediction 289 312 - -
Lal12g0564 634 SMART X8_cls 415 498 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0564 Lal-Chr12 4039672 4043042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0564 401 501 Glycoside Hydrolase AT2G05790 51.456 1.60e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0564 - - gmx:100794910 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0564 12 4039672 4043042 Lal12g0564 12 4039672 4043042 ECH
Lal12g0564 12 4039672 4043042 Lal24g0471 24 3318376 3325479 LSH
Lal3g1423 3 20133072 20135644 Lal12g0564 12 4039672 4043042 PCT
Lal18g0386 18 3299487 3302628 Lal12g0564 12 4039672 4043042 PCT
Lal12g0564 12 4039672 4043042 Lal3g1423 3 20133072 20135644 PCT
Lal12g0564 12 4039672 4043042 Lal18g0386 18 3299487 3302628 PCT