Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1366 ATGGAAACTACTCTGTGTTTAAAATGTGGCATTTATGGAATTTCACCTTCTATTCCAATAACTTCAAAAACTACATCACGCGCCATGGTTAGCGCGTTGGGTTGTTCTCCTTCTTCTTCTTCTGACAAAGGTTCTTTGTTTTCTAGTTCTAGATTCTCATTTAGGTACCCTTTGAAGTCTTTATGTCCTAAACAAATTTGTAGTGGCGGTTATGATGGTTTCTCTATAAACGACACCGTTTTGATGGACAAAATGGATACCCATAATGTAATAGAGGTTGAAGGTGAGGGGCAAAATGGGAACTGGGTTTTTAATATTTGTCATGCTAATTCTGTTTGGAGGAACAATGTTAATGATAATGATGAAAAAAAAGATGATGATGATGTTGTTGAAGAAGAAAAAGAAGAGTGTAATGGTTGTAGAGTTGAATATGATGATGATGAAAAAGAAGAAGAAGTTATATTTGATAGAGATTCATTTTCAAGAATGCTCAAAAGGGTGTCATTATCTGAAATAAGATTGTATGAGAAAATGTCCCATTTGGGTAACTTGGCTTATTCTATTCCCAATATAAAGCCAGGGTACCTCTTGAAACATTATGATCTGCGTTTTGTGACTTCGTCAATAGAGAAGAAGAAATTAGCTGCAACAGCTGAACAAAATCAGGCAACTCATGAAGAAGAAAGTAATGATAGGGATGAAGGAGACGGGAAGGAGCCGAAAAATAGCGGATACAAGATAAGTGCATCGGCTGCTTACGAGATTGCCGCTGCTGCTGCTTCTTATCTCCATGCTCAGACAAGGAGCATACTTCCATTTAAATCTTCAAATGATGAGGTTGGCGAAGGTTCTGTTGAAGCGAGCAACGAAAGCGTCGATGATGCTAACAAGAACAACACGCAGGCGGCTTCTTGGAAGGCAACTAGTGATTCGGTTACGGCTGTGGTTGCGGCAAAAGAGGAAGCAAAGCAGGCTTTTGCAGATAATATGAACTCAACAAGTTCTTCACCCTGTGAATGGTACATATGTGATGATGACCGGAGTTCTACACGATATTTTATTATTCAGGGTTCAGAGTCATTCGCATCATGGCAAGCAAATCTACTTTTTGAGCCAATTCAGTTTGAGGGGTTAGATGTCCTTGTCCATAGAGGTATATATGAGGCTGCTAAAGGGATATGTCAACAAATGTCGCCAGAAATTCATGCTCACCTAACATCAAAAGGTTCTAACGCAACATTTCGTTTCACTGGCCATTCTCTTGGGGGGAGCTTGGCATTACTTGTAAATCTCATGCTGTTGATAAGGAAGGAAGTGCCGGTCACCTCTCTGCTTCCCGTGATAACCTTCGGCGCCCCGTCCATCATGTGTGGGGGTGATAGCTTCCTAGAAAAGCTAGGATTGCCGCGCAATCATGTTCAGGCAATTACAATGCATAGAGATATAGTACCAAGAGCATTTTCTTGTAATTACCCTAAGCATGTTGCAGAACTACTAAAGGCTGTTAATAGCAACTTTCGCAATCATCCTTGTCTTAATAACCAGAAGTTACTATATGCACCAATGGGCGAATTTTTGATTCTACAGCCGGACGAGAATTTTTCGCCAAGCCATGATCTCCTGCCATCAGGAAGTGGACTATATCTTTTGTGCGGTCCTTCGTCAGAATCCAACGACACAGACGCGCAGCTCCGAGCTGCTCAGTTGGTCTTCTTGAATTCACCACATCCACTTGAGATATTGAGTGACCGATCCGCATATGGATCCGGAGGAACAATAATGAGAGACCATGACATGAATTCCTACTTAAAATCCGTGAGAACTGTGATCCGTCAAGAACTTAACCAGATTCGTAAGGCAAGTAGAGAGCAACGGCGAAAGGCTTGGTGGCCTCTTGCGAGATCGAGTGGAAGTGGCGCTGGCGATGTTGTTAGGAGATCCTTCGTATCATCGGTTAATGTGATTCACGACCAGCCTCCCTTTTCTGGAATCATACAAACAGGTATAGAATCCTTGAAATGGTTTGGTAGGCTTGTTAGATCCAATCATATGCATTTGTTTGTGGTGTTCTTGTTCCCTGCAAGATTGTTACTCTTGGAAGCATATAGTTTCATTAGCTTAAGATGA 2127 0.4156 METTLCLKCGIYGISPSIPITSKTTSRAMVSALGCSPSSSSDKGSLFSSSRFSFRYPLKSLCPKQICSGGYDGFSINDTVLMDKMDTHNVIEVEGEGQNGNWVFNICHANSVWRNNVNDNDEKKDDDDVVEEEKEECNGCRVEYDDDEKEEEVIFDRDSFSRMLKRVSLSEIRLYEKMSHLGNLAYSIPNIKPGYLLKHYDLRFVTSSIEKKKLAATAEQNQATHEEESNDRDEGDGKEPKNSGYKISASAAYEIAAAAASYLHAQTRSILPFKSSNDEVGEGSVEASNESVDDANKNNTQAASWKATSDSVTAVVAAKEEAKQAFADNMNSTSSSPCEWYICDDDRSSTRYFIIQGSESFASWQANLLFEPIQFEGLDVLVHRGIYEAAKGICQQMSPEIHAHLTSKGSNATFRFTGHSLGGSLALLVNLMLLIRKEVPVTSLLPVITFGAPSIMCGGDSFLEKLGLPRNHVQAITMHRDIVPRAFSCNYPKHVAELLKAVNSNFRNHPCLNNQKLLYAPMGEFLILQPDENFSPSHDLLPSGSGLYLLCGPSSESNDTDAQLRAAQLVFLNSPHPLEILSDRSAYGSGGTIMRDHDMNSYLKSVRTVIRQELNQIRKASREQRRKAWWPLARSSGSGAGDVVRRSFVSSVNVIHDQPPFSGIIQTGIESLKWFGRLVRSNHMHLFVVFLFPARLLLLEAYSFISLR 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1366 708 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 38 704 IPR043367 GO:0008970
Lal3g1366 708 Pfam Lipase (class 3) 353 490 IPR002921 GO:0006629
Lal3g1366 708 Gene3D alpha/beta hydrolase 284 521 IPR029058 -
Lal3g1366 708 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 38 704 - -
Lal3g1366 708 Coils Coil 130 150 - -
Lal3g1366 708 Coils Coil 603 623 - -
Lal3g1366 708 SUPERFAMILY alpha/beta-Hydrolases 335 525 IPR029058 -
Lal3g1366 708 MobiDBLite consensus disorder prediction 281 304 - -
Lal3g1366 708 MobiDBLite consensus disorder prediction 216 243 - -
Lal3g1366 708 MobiDBLite consensus disorder prediction 275 304 - -
Lal3g1366 708 MobiDBLite consensus disorder prediction 224 241 - -
Lal3g1366 708 CDD Lipase_3 336 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1366 Lal-Chr3 19432653 19436079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1366 4 708 Acyl Lipid Metabolism Gene Families AT1G02660 52.861 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1366 - - gmx:100788786 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1366 3 19432653 19436079 Lal3g1366 3 19432653 19436079 ECH
Lal3g1366 3 19432653 19436079 Lal12g0521 12 3695435 3698960 PCT
Lal3g1366 3 19432653 19436079 Lal13g0520 13 3353039 3356464 PCT
Lal3g1366 3 19432653 19436079 Lal24g0418 24 2966150 2969600 PCT
Lal12g0521 12 3695435 3698960 Lal3g1366 3 19432653 19436079 PCT
Lal13g0520 13 3353039 3356464 Lal3g1366 3 19432653 19436079 PCT
Lal24g0418 24 2966150 2969600 Lal3g1366 3 19432653 19436079 PCT