Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0418 ATGGAAATCATGTGTTTAAAATCTGGGATCTCAGGTATAGTACCTTCCATTTCCACGGCCGCATCTTTGGATTCACGCGCCGCCGCCAATTCTTCTCGCGTAAACGCGATTAGCCGGTCGGCGCCGTTGGATAAAGCGTCACAGAAGTCGGTGTTCTCCAGTTTCTCCTTTAAATACCCTCTGGAATCTCTCTGGCCGCGGCCCCGGGAAACCGGGAATAGCCGGTACAGTGGGTTAGCCCTCGACGACGCCGTATTGGAAGAAAACGCTGAAGCTGGACACGACGCCGTTGAGGAGGGGCGAAATGGGAATTGGGTATTGAAGATTTTGCGTGTGAATTCTGTGTGTAAAGGGGAAGAAGGGAAGAAGAGTGTTGTTGAAGAAGGGAAAGATAATGAGAGCAATGAAAATGAAGAGAACGCGTGTAAGTGTAATGGTTGTAAGGTTAATGATGATGATGATGATGACGAAAAAGAAGAAGAAAATTTTCAATTTGATAGAGACTCTTTTTCAAGAATGTTAAAAAGGGTGTCTTTAGCAGAAGCTAGATTATATGCTCAAATGTCACACTTAGGGAACTTGGCATATTCTATACCAAATATCAATCCAGCGAAACTCTTGAAACATTATGGTCTGCGTTTAGTAACTTCATCAATCGAGAAGAAGGAATTGACATCGGCAATAGTTGAAAACAATCCTCAAGAAGTAGAGACTAAAGTAAAGGAAGAGGATGATGAAGAAAGAAAGGAGCAGAAAGATCATGGATACAGGGTAAGTGCATCTGCTGCATATCATATAGCTGCTTCTGCTGCTTCTTATCTCCATGCCCAAACAAGGAGAGTACTACCATTCAAATCTTCAAATGCTTTGGCTGGTGAAGGTTCACTTGAAGGAAGCAGCGAAAGCGTTGATATTAACACAGAGATGGCTTCTCTGATGGCAACTACTGATTCAATGACAGCAGTGGTTGCAGCAAAGGAGGAAGTAAAGCAGGCTGTTGCAGATGATCTAAGCTCAACACGCTCGTCACCCTGTGAATGGTTTGTCTGTGATGATGACCAGAGTGCTACAAGATATTTTGTTATTCAGGGTTCTGAAACATTGGCGTCCTGGCAAGCAAACCTCCTTTTTGAGCCGATCCAATTTGAGGGGTTGGATGTTCTCGTGCACAGAGGTATATATGAGGCTGCTAAAGGGATGTATCTACAGATGCTGCCAGAAGTTCATGCTCACCTAAAAGCTCACGGTTCTCGTGCAACTTTCCGTTTCAGCGGGCATTCTCTTGGGGGAAGCTTGGCATTACTTGTAAATCTTATGCTCTTGATAAGGCAAGAATTGTCAATCTGCTCTCTACTTCCTGTGATAACCTTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGTCTATTAAACAAGCTCGGATTGCCAAGGAGCAATGTACAGGCTATCACAATGCACAGAGATATCGTACCACGGGCATTTTCTTGCAATTACCCTAATCATGTTGCCGAACTCCTTAAGGCCGTTAATCGGAATTTCCGTAATCATCCTTGTCTTGATAGCCAAAAACTACTATTTGCTCCAATGGGTGAACTGCTGATACTACAACCAGACAAGAAATTTTCACCAAGCCATCCTCTCTTGCCTTCAGGCAGTGGTCTATATATTTTGACTTGTCCCTTGTCAGAATCCATTAACACAGGCAAATCACTCATGGCTGCTCAGTTAGTCTTCTTGAACTCACCTCATCCACTTGAGATACTAAGTGACCGATCTGCTTATGGATCTGGAGGAACTATACAAAGAGATCATGACATGAATTCCTACGTAAAAACTGTGAGGTCAGTGATTCGCCTAGAACTTAAACAGACCCGTAAGGCGAGAAGAGAGCAACGGCGCAAGGTACGGTGGCCTCTTGTGTTACCAAGTGGAATTGATGGCAGCATTGTTGTTGGGAGGTCCATGGTTTCAGTGAATCTGGGTCATAGTAAGTACCCCTTCTCTGGCATGATAAAAACAGGGAGAGAGTCCTTGAAAAGGTTCAGCAGACTTGTTGCATCCCAACATATGCACTTGTTCTTGTTGATTTTGTTCCCTGCACGGTTGTTATTCTTAGGGACATATAACATGACTAACTTTAGATGA 2145 0.4392 MEIMCLKSGISGIVPSISTAASLDSRAAANSSRVNAISRSAPLDKASQKSVFSSFSFKYPLESLWPRPRETGNSRYSGLALDDAVLEENAEAGHDAVEEGRNGNWVLKILRVNSVCKGEEGKKSVVEEGKDNESNENEENACKCNGCKVNDDDDDDEKEEENFQFDRDSFSRMLKRVSLAEARLYAQMSHLGNLAYSIPNINPAKLLKHYGLRLVTSSIEKKELTSAIVENNPQEVETKVKEEDDEERKEQKDHGYRVSASAAYHIAASAASYLHAQTRRVLPFKSSNALAGEGSLEGSSESVDINTEMASLMATTDSMTAVVAAKEEVKQAVADDLSSTRSSPCEWFVCDDDQSATRYFVIQGSETLASWQANLLFEPIQFEGLDVLVHRGIYEAAKGMYLQMLPEVHAHLKAHGSRATFRFSGHSLGGSLALLVNLMLLIRQELSICSLLPVITFGSPSIMCGGDSLLNKLGLPRSNVQAITMHRDIVPRAFSCNYPNHVAELLKAVNRNFRNHPCLDSQKLLFAPMGELLILQPDKKFSPSHPLLPSGSGLYILTCPLSESINTGKSLMAAQLVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYVKTVRSVIRLELKQTRKARREQRRKVRWPLVLPSGIDGSIVVGRSMVSVNLGHSKYPFSGMIKTGRESLKRFSRLVASQHMHLFLLILFPARLLFLGTYNMTNFR 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0418 714 SUPERFAMILY alpha/beta-Hydrolases 343 533 IPR029058 -
Lal24g0418 714 MobiDBLite consensus disorder prediction 121 141 - -
Lal24g0418 714 Pfam Lipase (class 3) 360 497 IPR002921 GO:0006629
Lal24g0418 714 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 26 710 - -
Lal24g0418 714 CDD Lipase_3 341 499 - -
Lal24g0418 714 MobiDBLite consensus disorder prediction 121 138 - -
Lal24g0418 714 MobiDBLite consensus disorder prediction 235 255 - -
Lal24g0418 714 Gene3D alpha/beta hydrolase 301 524 IPR029058 -
Lal24g0418 714 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 26 710 IPR043367 GO:0008970
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0418 Lal-Chr24 2966150 2969600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0418 1 714 Acyl Lipid Metabolism Gene Families AT1G02660 56.563 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0418 - - gmx:100807834 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0418 24 2966150 2969600 Lal24g0418 24 2966150 2969600 ECH
Lal12g0521 12 3695435 3698960 Lal24g0418 24 2966150 2969600 LSH
Lal13g0520 13 3353039 3356464 Lal24g0418 24 2966150 2969600 LSH
Lal3g1366 3 19432653 19436079 Lal24g0418 24 2966150 2969600 PCT
Lal24g0418 24 2966150 2969600 Lal3g1366 3 19432653 19436079 PCT