Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0521 ATGGAAACCATGTGTTTAAAAACTGGGATCTCACCCATAGTACCCTCCATCTCCACCTCCGCGTCTGTGGATACACGCGCCGCCACTAACCCTTCTCACGTCAGCGCGATGTCTCGATCGCCGGACGCGAACAAACCGTTTCAGAAGTCGGTGTTCTCCAGATTCTCATTTAAATATCCTTTGGAATCTCTCTGGCCCAGGCACCGGGAAACGGAGAGTAGCCGGTACAGTGGGCTTGCCCTCGACGATGCCGTATTGGAAGAGAACGCGGAAGGTGAAAACGACGTCGTTGAGGATGTATCGGAGGAGGAACAGAATGAAAATTGGGTATTGAAGATTTTGCATGTGAATTCTGTGTGGAAAGGGGAAGAGGGGAAGAAGAACGGTGTTATCCATGAAGGGAAAGGTGATGAAAGCAATGAGGAAGAGAAGAAAGTGTGTGAGTGTGATGGTTGCAGGGTTGAAAATGATGATGGTGAAAAAGAAGAAGAAGAAGTTCAATTTGATAGAGACTCGTTTTCAAGAATGCTTAGAAGGGTGTCTTTGGCTGAAGCTAGATTATATGCTCAAATGTCATACTTGGGGAATTTGGCTTATTCTATTCCAAATATCAATAAAGGTGATGGACATGGACCGGCGAAACTCTTGAAACATCATGGTTTGCGTTTAGTGACTTCATCGATAGAGAAGAAGGAATTGGCAGCAGCAACAGTTGAATACAATCCTCAAGAAGTAGAAACTAATGAAAAGGATGAAGAAGAAGAAAGAAAGGGGCAGAGAGACAATGGATACAGGATAAGTGCAGCTGCTGCTTATCATATTGCTGCCACTGCTGCCTCTTATCTGCATGCACAGACAAGGAGAGTACTTCCGTTCAAATCGTCGGATGCAGTTGATGATGAAGGTTCACTTGAAGGTAGCAGTGGAAGCCTTGACATTAACACAGAGATGGCATCTTTGATGGCAACTACTGATTCAATGACAGCAGTTGTTGCGGCAAAGGAGGAAGTAAAGCAGGCTGTTGCAGATGATCTAAACTCAACACATTCTTCACCCTGTGAATGGTTCGTGTGTGATGATGACCAGAGTGGTACAAGATTTTTTGTCATTCAGGGTTCTGAGACATTGGCATCCTGGCAAGCAAACCTACTTTTTGAGCCGATTCAGTTTGAGGGGTTAGATGTCCTTGTACACAGAGGTATTTATGAGGCTGCTAAAGGGATGTATCAACAGATGTTGCCAGAAGTTCATGCTCACCTAAAAGCTCACGGTTCTCACGCAACTTTCCGTTTCACCGGACATTCTCTTGGGGGAAGCTTGGCATTACTTGTAAACCTTATGCTCTTGATTAGGCAAGAAGTGCCAATCTCCTCTCTACTTCCTGTGATAACTTTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGACTGCTAAACAAGCTCGGTTTGCCACAGAGCCATGTGCAGGCAATTACAATGCACAGAGACATTGTACCACGAGCATTTTCTTGCAATTACCCTAATCAAGTTGCCGACCTACTAAAGGCTGTTAATCGGAATTTCCGTAATCATCCTTGTCTCAATAGCCAAAAACTACTATTTGCTCCAATGGGTGAACTGCTGATTCTACAACCAGACAAGAAATTTTCACCAAGTCATCCTCTCTTGCCTTCAGGCAGTGGTCTATATCTTTTAAGTTGTCCTTTGTCGGAATCCAATAACACAGACAAGCTGCTCCGCGCTGCTCAGTTAGTCTTCTTGAACTCACCTCACCCACTTGAAATATTAAGTGACCGATCTGCTTATGGATCTGGAGGAACTATACAAAGAGATCATGACATGAATTCATACTTAAAGACAGTGAGAACCGTGATTCGCCAAGAACTTAACCAGATCCGTAAGTCGAGGAGAGAGCGACGGCGCAAGGTATGGTGGCCTCTTGTGTTACCAAGAGGAATTGATGCCAGCTTTGTAGTTGGGAAATCAATGGTTTCAGTCAATCTGGGTCATAACCAGTACCCCTTCTCTGGCATGATACAAAAAGGGAGAGAGTCCTTGAAAAGGTTCAGCAGGCTTGTTGCATCTCAACACATGCACTTGTTTGTGTTGCTCTTGTTCCCTGCACGCTTGTTACTCCTAGGGATACAACGTGATTAA 2157 0.4474 METMCLKTGISPIVPSISTSASVDTRAATNPSHVSAMSRSPDANKPFQKSVFSRFSFKYPLESLWPRHRETESSRYSGLALDDAVLEENAEGENDVVEDVSEEEQNENWVLKILHVNSVWKGEEGKKNGVIHEGKGDESNEEEKKVCECDGCRVENDDGEKEEEEVQFDRDSFSRMLRRVSLAEARLYAQMSYLGNLAYSIPNINKGDGHGPAKLLKHHGLRLVTSSIEKKELAAATVEYNPQEVETNEKDEEEERKGQRDNGYRISAAAAYHIAATAASYLHAQTRRVLPFKSSDAVDDEGSLEGSSGSLDINTEMASLMATTDSMTAVVAAKEEVKQAVADDLNSTHSSPCEWFVCDDDQSGTRFFVIQGSETLASWQANLLFEPIQFEGLDVLVHRGIYEAAKGMYQQMLPEVHAHLKAHGSHATFRFTGHSLGGSLALLVNLMLLIRQEVPISSLLPVITFGSPSIMCGGDRLLNKLGLPQSHVQAITMHRDIVPRAFSCNYPNQVADLLKAVNRNFRNHPCLNSQKLLFAPMGELLILQPDKKFSPSHPLLPSGSGLYLLSCPLSESNNTDKLLRAAQLVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYLKTVRTVIRQELNQIRKSRRERRRKVWWPLVLPRGIDASFVVGKSMVSVNLGHNQYPFSGMIQKGRESLKRFSRLVASQHMHLFVLLLFPARLLLLGIQRD 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0521 718 MobiDBLite consensus disorder prediction 241 262 - -
Lal12g0521 718 Coils Coil 87 107 - -
Lal12g0521 718 CDD Lipase_3 351 509 - -
Lal12g0521 718 Pfam Lipase (class 3) 368 505 IPR002921 GO:0006629
Lal12g0521 718 Gene3D alpha/beta hydrolase 313 532 IPR029058 -
Lal12g0521 718 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 23 714 - -
Lal12g0521 718 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 23 714 IPR043367 GO:0008970
Lal12g0521 718 SUPERFAMILY alpha/beta-Hydrolases 350 541 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0521 Lal-Chr12 3695435 3698960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0521 1 714 Acyl Lipid Metabolism Gene Families AT1G02660 55.034 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0521 - - gmx:100807834 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0521 12 3695435 3698960 Lal12g0521 12 3695435 3698960 ECH
Lal12g0521 12 3695435 3698960 Lal13g0520 13 3353039 3356464 LSH
Lal12g0521 12 3695435 3698960 Lal24g0418 24 2966150 2969600 LSH
Lal3g1366 3 19432653 19436079 Lal12g0521 12 3695435 3698960 PCT
Lal12g0521 12 3695435 3698960 Lal3g1366 3 19432653 19436079 PCT