Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0520 ATGGAAACCATGTGCTTAAAAACAGGGATCTCTGGCATTGTCCCCTCAATCTCCACGGCGGCATCTTTAAGTTCACGCGCCGCCACCAACCCTTCTCACGTGAACGCAATGGGTCGCTCCGATAAACCATCGCAGAAGTCTGTGTTCTCCAGATTCTCCTTTAAATACCCTCTGGAGTCTCTCTGGCCGCGACCACGTGAAACCGGGAATAGCCGGTACAGTGGACTTGCCATCAACGACGCCGTATTGGAAGAGAACGCAGAAGCTGAAAACGACGTCGTTGAGAAGAGAGCGGAGGAGGGACAGAATGGGAATTGGATATTGAAGATTTTGAATGTGAAAACTGTGTGGAAAGGGGAAGAAGGAAAGGACGGTGTTGTTGAAGAAGAGAAGAGTGGTGAAAGCAACGAGTGTGAGTGTGATGGTTGTAACGTTGATGATGACGAAAAAGTAGAAGAAAAGGTTCAATTTGATAGAGACTCGTTTTCCAGAATGTTAAGAAGGGTGTCTTTAGTTGAAGCTAGATTATATGCTCAAATGTCACACTTGGGGAACATGGCATATTCTATACCAAATATCAATCCGGCGAAACTCTTGAAGCACTATGGTCTGCGTTTAGTAACTTCATCAATAGAGAAGAAGGAATTGGCAGCAGCAACAGCAACGGTTGAAAACAATCCCAAAGAAGTAGAAACTAATGAAAATGAAGAAGAAAGAAATAAGCAGAAAGAGAGTGCATACAGGTTAAGTGCCTCTGCTGCTTATCATATTGCTGCCTCTGCTGCCTCTTACCTGCATGCTCAGACAAGGAGAGTACTTCCATTCAAATCTTCTGATGCAGTTGATGGTGAAGGTTCACTCGAAGGAAGCAACGAAAGCCTTGATATTAATACAGAGATGGCATCTTTGATGGCAACTACAGATTCAGTGACAGCAGTTGTTGCGGCAAAGGAGGAAGTAAAGCAGGCTGTTGCAGATGATCTAAACTCAACACGTTCTTCACCCTGCGAATGGTTCGTGTGCGATGATGACCAGAGGGGTACAAGATTTTTTATTATTCAGGGTTCCGAAACATTGGCATCCTGGCAAGCAAACCTACTTTTTGAGCCGATTCAGTTTGAGGGGTTGGATGTCCTTGTGCACAGAGGTATTTATGAGGCTGCTAAAGGGATGTATCAACAGATGTTGCCAGAAGTTCATGCTCACCTAAAAGCTCATGGTTCTCGCTCAACTTTCCGTTTCACCGGGCATTCTCTCGGTGGAGGCTTGGCATTACTTGTAAGTTTTATGCTCTTGTTCAGGCAAGAAGTGCCAATCTCGTCTCTACTTCCTGTGATAACTTTTGGTTCCCCATCCATCATGTGTGGAGGTGATAGTCTGTTAAACAAGCTCGGATTGCCACAGAGCCATGTGCAGGCTATTACAATGCACAGAGACATCGTACCACGAGCATTTTCTTGCAATTACCCGAATCATGTTGCCAAACTACTAAAGGCTGTCAATCGGAATTTCCGTAACCATCCTTGTCTTAATAGCCAAAAACTACTATTTGCACCGATGGGTGAACTTCTGATTCTACAACCAGACAAGAAATTTTCACCAAGCCATCCCCTCTTGCCTTCAGGCAGTGGTCTATATCTTCTGAGTTGTCCTTTGTCAGAATCCAACGACACAGAAAATCTTATCGGGGCTGCTCGGTCAGTCTTCTTGAACTCACCCCATCCACTTGAGATATTAAGTGACCGATCAGCTTATGGATCTGGAGGAACAATAAAAAGGGATCATGACATGAGTTCCTACTTAAAGACTGTAAGAACGGTGATACGTCAAGAACTTAACCAGATCCATAAGGCAAAGAGAGAGCAAAGGCGCAAGTTACAGTGGCCCATTGTGTTACCAAGAGGAATTGATGCCAGCTTTGTTGTTGGGAGGTCCATGGTTTCAGTCAATCTGGGTCACAATCAGTACCCCTTCTTTGGCATGATACGAACAGGGAGAGAGTCCTTGAAAAGGTTCAGCAGGCTTGTTGCATCCCAACGTATGCACTTGTTTGTGTTGCTCTTATTCCCTGCACGGTTGTTGCTCATAGGAGCATATAACGTGATTAATTTCAGATGA 2118 0.4476 METMCLKTGISGIVPSISTAASLSSRAATNPSHVNAMGRSDKPSQKSVFSRFSFKYPLESLWPRPRETGNSRYSGLAINDAVLEENAEAENDVVEKRAEEGQNGNWILKILNVKTVWKGEEGKDGVVEEEKSGESNECECDGCNVDDDEKVEEKVQFDRDSFSRMLRRVSLVEARLYAQMSHLGNMAYSIPNINPAKLLKHYGLRLVTSSIEKKELAAATATVENNPKEVETNENEEERNKQKESAYRLSASAAYHIAASAASYLHAQTRRVLPFKSSDAVDGEGSLEGSNESLDINTEMASLMATTDSVTAVVAAKEEVKQAVADDLNSTRSSPCEWFVCDDDQRGTRFFIIQGSETLASWQANLLFEPIQFEGLDVLVHRGIYEAAKGMYQQMLPEVHAHLKAHGSRSTFRFTGHSLGGGLALLVSFMLLFRQEVPISSLLPVITFGSPSIMCGGDSLLNKLGLPQSHVQAITMHRDIVPRAFSCNYPNHVAKLLKAVNRNFRNHPCLNSQKLLFAPMGELLILQPDKKFSPSHPLLPSGSGLYLLSCPLSESNDTENLIGAARSVFLNSPHPLEILSDRSAYGSGGTIKRDHDMSSYLKTVRTVIRQELNQIHKAKREQRRKLQWPIVLPRGIDASFVVGRSMVSVNLGHNQYPFFGMIRTGRESLKRFSRLVASQRMHLFVLLLFPARLLLIGAYNVINFR 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0520 705 Coils Coil 79 99 - -
Lal13g0520 705 SUPERFAMILY alpha/beta-Hydrolases 334 524 IPR029058 -
Lal13g0520 705 MobiDBLite consensus disorder prediction 218 243 - -
Lal13g0520 705 Coils Coil 601 621 - -
Lal13g0520 705 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 38 702 - -
Lal13g0520 705 Pfam Lipase (class 3) 351 488 IPR002921 GO:0006629
Lal13g0520 705 Gene3D alpha/beta hydrolase 292 515 IPR029058 -
Lal13g0520 705 MobiDBLite consensus disorder prediction 229 243 - -
Lal13g0520 705 CDD Lipase_3 332 490 - -
Lal13g0520 705 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 38 702 IPR043367 GO:0008970
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0520 Lal-Chr13 3353039 3356464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0520 1 705 Acyl Lipid Metabolism Gene Families AT1G02660 55.345 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0520 - - gmx:100807834 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0520 13 3353039 3356464 Lal13g0520 13 3353039 3356464 ECH
Lal12g0521 12 3695435 3698960 Lal13g0520 13 3353039 3356464 LSH
Lal13g0520 13 3353039 3356464 Lal24g0418 24 2966150 2969600 LSH
Lal3g1366 3 19432653 19436079 Lal13g0520 13 3353039 3356464 PCT
Lal13g0520 13 3353039 3356464 Lal3g1366 3 19432653 19436079 PCT