Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0524 ATGGTTGCTTTCGTTTCCCAAGACAATGTTGTAGCATTGGTTTCTCGTACCGGTAGGGAGTTACAACGTTATAGAAAAGGTCGTCGCCAAGTTGTGGGTTGCATACCATACAGATATAAAATTGGTGAGAAAACTTGCTTGGAGGTTGATAAATTAGAAGTTCTTGTTATTAGTTCTCAGAATCAGAAAACCAAAGGGATGCTATTTCCAAAGGGAGGCTGGGAATTAGACGAATCTAAAAAGGAGGCAGCTTTGAGAGAAACCTTGGAAGAAGCAGGAGTAAGAGGCATTGTTGGGGGTAAATTGGGTAAATGGAGTTTCAAGAGTAAGAGCCATGATACTTTCTATGAAGGCTACATGTTCCCTCTACTTGTTCAAGAGCAATTAGAGTTCTGGCCTGAGCACAATGTTCGTCAAAGAATATGGATGAGTGTGAATGAAGCAAGAGAAGTTTGTCAACACTGGTGGATGAAAGAAGCACTTGACAGATTAGTAAACCGTCTTTCAGGTTCAAAACTTGGTCATGGAAAAGAAGTTATATCCTCTCTAAACTGCATAGAAGATGCAATATCTGCCTTGTAA 582 0.4021 MVAFVSQDNVVALVSRTGRELQRYRKGRRQVVGCIPYRYKIGEKTCLEVDKLEVLVISSQNQKTKGMLFPKGGWELDESKKEAALRETLEEAGVRGIVGGKLGKWSFKSKSHDTFYEGYMFPLLVQEQLEFWPEHNVRQRIWMSVNEAREVCQHWWMKEALDRLVNRLSGSKLGHGKEVISSLNCIEDAISAL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0524 193 CDD Nudix_Hydrolase_9 30 158 - -
Lal3g0524 193 SUPERFAMILY Nudix 21 168 IPR015797 -
Lal3g0524 193 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 180 - -
Lal3g0524 193 ProSitePatterns Nudix box signature. 72 93 IPR020084 GO:0016787
Lal3g0524 193 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 167 - -
Lal3g0524 193 Pfam NUDIX domain 50 162 IPR000086 -
Lal3g0524 193 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 180 - -
Lal3g0524 193 ProSiteProfiles Nudix hydrolase domain profile. 27 165 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0524 Lal-Chr3 3830017 3832248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0524 K07766 - gmx:100795999 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0524 3 3830017 3832248 Lal5g1200 5 14772205 14774663 LSH
Lal3g0524 3 3830017 3832248 Lal22g0284 22 1807050 1808960 PCT
Lal3g0524 3 3830017 3832248 Lal6g0307 6 1966445 1974779 PCT
Lal22g0284 22 1807050 1808960 Lal3g0524 3 3830017 3832248 PCT
Lal6g0307 6 1966445 1974779 Lal3g0524 3 3830017 3832248 PCT