Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1081 ATGGAGTTGTTGGGGGTTGCAAAGTTTAAGTGTGGTCTTGTTCTTATGTTATTTGTTGCATTGTTTTTGGGTTCAGTGAGTGGAATTGGTGTTAATTGGGGTACACAATCAACACACCCTTTGCCACCAACCACTGTAGTGAAAATGCTAAAAGACAATGGTATTCAGAAAGTTAAGCTTTTTGATGCTGATTCTGGTATTTTAGATGCTCTAAAGAAATCTGAGATTCAAGTTATGGTGGGTATTCCAAATGATATGCTATATATACTAGCTAATAGTGTTCAAGCAGCTGAAAAATGGGTTTCCAAGAATATTTCAGCACATGTTTCATCTGGAGGAGTAGACATTAGGTATGTTGCAGTGGGAAATGAACCATTCTTGTCAACTTATAATGGTACCTTTGAATCTACAACTCTTCCAGCTCTTCAAAATATCCAATCAGCTCTTATAAAATCTGGTTTGGGCAATCAGGTTAAAGTCACTGTCCCTATGAACGCTGATGTCTATCTGAGCGCATCCGATAAACCTTCCGATGGCGACTTCAGGCCCGACATCCACGATCTCATGCTGCAGATTGTCAAGTTCTTGAGCCAGAATAATGCTCCATTTACAGTGAACATATATCCTTTTATCAGCCTCTATTCAGATGCAAATTTCCCTGTCGACTTCGCCTTTTTCAACGGCTTCCAGTCTCCCATAAATGACAACGGAAGGATCTATGACAATGTCTTAGATGCAAACCATGACACTCTAGTATGGGCACTGCAGAAGAATGGTTTCGGAAACTTGCCCATAATTGTTGGAGAAATCGGGTGGCCTACAGATGGAGACCGTAATGCAAATTTTCAATACGCGCAACGTTTTAACCAAGGCTTCATGTCCCGTTTCGTTGCCGGAAAGGGTACTCCAATGAGGCCTGGTCCTATAGATGCATACTTGTTTAGCTTCATAGATGAGGATGACAAAAGCATCCAGCCAGGTAATTTCGAACGCCATTGGGGGCTGTTTTACTACGATGGAAAACCGAAATATCCGCTTAACCTCGGAACAAGAACCAATGGTTTAGTAGGTGCTAGTGGTGTTGCATATCTACCTAAAAAATGGTGTATTCTGAAACCCTCAGCAAACCTGAATAGTGATCAAGTAGCACCAAGTGTGTCTTATGCATGTCAAAATGCCGATTGCACTAGTCTCGGTTACGGAACTTCATGTGCGGGCTTAGATATTCGCGGTAATCTCTCGTATGCATTCAATAGCTACTACCAGGTGAATGACCAGATGGACAGTGCATGCAAATTCCCTGGCCTTTCTGTTGTTACTGACAAAGATCCTTCAACTCCAAGTTGCAAATTCATAATCATGATTCAGACAGATTCTGCTGAACTTATTAGGAATGGGAAGAGAATTTGGTCCTTACCAATAATGCTTTGTGTACTTTTGTTTCTTAATGTTATGTAA 1458 0.4108 MELLGVAKFKCGLVLMLFVALFLGSVSGIGVNWGTQSTHPLPPTTVVKMLKDNGIQKVKLFDADSGILDALKKSEIQVMVGIPNDMLYILANSVQAAEKWVSKNISAHVSSGGVDIRYVAVGNEPFLSTYNGTFESTTLPALQNIQSALIKSGLGNQVKVTVPMNADVYLSASDKPSDGDFRPDIHDLMLQIVKFLSQNNAPFTVNIYPFISLYSDANFPVDFAFFNGFQSPINDNGRIYDNVLDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANFQYAQRFNQGFMSRFVAGKGTPMRPGPIDAYLFSFIDEDDKSIQPGNFERHWGLFYYDGKPKYPLNLGTRTNGLVGASGVAYLPKKWCILKPSANLNSDQVAPSVSYACQNADCTSLGYGTSCAGLDIRGNLSYAFNSYYQVNDQMDSACKFPGLSVVTDKDPSTPSCKFIIMIQTDSAELIRNGKRIWSLPIMLCVLLFLNVM 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1081 485 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Lal25g1081 485 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 16 465 - -
Lal25g1081 485 Pfam Glycosyl hydrolases family 17 29 347 IPR000490 GO:0004553|GO:0005975
Lal25g1081 485 Gene3D Glycosidases 28 354 - -
Lal25g1081 485 SMART X8_cls 367 451 IPR012946 -
Lal25g1081 485 Gene3D - 364 462 - -
Lal25g1081 485 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 465 IPR044965 GO:0004553|GO:0005975
Lal25g1081 485 Pfam X8 domain 367 436 IPR012946 -
Lal25g1081 485 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1081 Lal-Chr25 14126219 14129430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1081 9 461 Glycoside Hydrolase AT4G31140 71.965 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1081 K19893 - gmx:100790297 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1547 8 19809245 19811691 Lal25g1081 25 14126219 14129430 LSH
Lal25g1081 25 14126219 14129430 Lal4g0600 4 4362342 4364008 PCT
Lal4g0245 4 1583004 1586546 Lal25g1081 25 14126219 14129430 PCT