Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1076 ATGCTCAAAAATTTCCTTAACAAGCTTTCTCGGAAGTCAAAACTTGATTCGGAAGGCGATTCCTCACGTTCCACCGCCTCGCCACACGGTGTTTCTGAAAAAATCCACCGTCAGCACGGTGGTGGTGGCGGTGGTTCTTCTGCTGCGGCGAAACGAGCTTCTGCGTCTGCAGTTTTTCCAGCGAGCATGGTGTCTGGGATTGAACCTTTGGTGCCATTCAAGGATGTTCCAAATTCTGAAAAGATGAATCTTTTTGTGAGCAAATTGAGCCTTTGTTGTGTTACCTTTGATTTTTCTGACCCTGGTAAGAATATTGTGGAGAAAGATGTGAAAAGGAGAACATTGTTTGAACTTGTTGATTTTGTGGCTTGTGGTGGTTCAATGAAATTTAGTGAACATGCTATCCTTGCAATGTGTAAAATGTTTGCTATTAATCTATTTCGAGTTTTTCCGCCGAATTATAGGACTAATGGAGGTGTTAGTGAGAATGATGATGATGAGCTTATGTTTGATCCTGCTTGGCCACATTTACAATATGTGTATGAATTGATGGTTACATTTATATCGTCTTCGTGCCTTGATGCTAAGGTAGCGAAGAAGTACATCGATCATTCGTTTATATCCAAATTGCTTGATTTGTTTGAATCCGATGATCCTAGAGAAAGAGACTGCTTGAAGACAATTCTGCATAGGATTTATGGGAAGTTCATGGTGCATAGACCCTTTATTCGAAAATCAATGAGCAATATATTTTATCAGTTCGTGTTCGAGACTGAGAAACACAATGGAATTGCTGAGTTGTTGGAGGTTTTCGGGAGTGTGATTAGTGGGTTTGCTTTGCCTTTGAAAGAGGAACACAAGATATTCTTGTGGAGAGTTTTGATCCCACTGCACAAGCCGAAATCTATCGATGTCTACTTTCAACAATTGTCTTACTGCATTACACTGTTTATAGAGAAGGAGACCAAGTTAGCAAGCATCATTATAAATGGTTTGTTAAAATATTGGCCGGTGACAAATAGTCAGAAAGAGGTGATGTTTCTTGGTGAACTGGAAGAAATTTTGGAAGTAATTAACATGGTTGAATTCCAGAGGATCATGATCCCATTGTTTTTGCGGATTGGATGCTGTATTAACAGCTTACATTTTCAGGTTGCAGAAAGAGCCCTTTACTTATGGAACAATGACCACATTGTCAACTTAATTGCTCATAATCGGCAAGTGATCCTACCGATCATATTTCCCGCTCTAGATAGGAATGCTCATAGCCACTGGAACCCGGCAGTTATTAACCTAACTCACAATGTTAGAAAGATGTTCTCGGAGATTGATGAGAAACTCTACATTTCTTGTCATTCTCACTTCAAGGAGGACGAAGCAAATTTAAGCGCAGAAGCTGAGAAGCGGAAGGAAGCGTGGAAACAACTAGAGCATGCAGCTAGTCTCAAGCCTGTAACCGAAAATACTGCTGTTCTAGTGTCTCCTTTAATGACCTGA 1497 0.4041 MLKNFLNKLSRKSKLDSEGDSSRSTASPHGVSEKIHRQHGGGGGGSSAAAKRASASAVFPASMVSGIEPLVPFKDVPNSEKMNLFVSKLSLCCVTFDFSDPGKNIVEKDVKRRTLFELVDFVACGGSMKFSEHAILAMCKMFAINLFRVFPPNYRTNGGVSENDDDELMFDPAWPHLQYVYELMVTFISSSCLDAKVAKKYIDHSFISKLLDLFESDDPRERDCLKTILHRIYGKFMVHRPFIRKSMSNIFYQFVFETEKHNGIAELLEVFGSVISGFALPLKEEHKIFLWRVLIPLHKPKSIDVYFQQLSYCITLFIEKETKLASIIINGLLKYWPVTNSQKEVMFLGELEEILEVINMVEFQRIMIPLFLRIGCCINSLHFQVAERALYLWNNDHIVNLIAHNRQVILPIIFPALDRNAHSHWNPAVINLTHNVRKMFSEIDEKLYISCHSHFKEDEANLSAEAEKRKEAWKQLEHAASLKPVTENTAVLVSPLMT 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1076 498 Gene3D - 77 479 IPR011989 -
Lal25g1076 498 PIRSF PP2A_B56 4 496 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal25g1076 498 SUPERFAMILY ARM repeat 83 476 IPR016024 -
Lal25g1076 498 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 72 480 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal25g1076 498 MobiDBLite consensus disorder prediction 1 49 - -
Lal25g1076 498 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 494 - -
Lal25g1076 498 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1076 Lal-Chr25 14076896 14080841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1076 K11584 - gmx:100781390 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1076 25 14076896 14080841 Lal10g0009 10 100166 105115 LSH
Lal25g1076 25 14076896 14080841 Lal17g0252 17 1568174 1571329 PCT
Lal25g1076 25 14076896 14080841 Lal4g0236 4 1483776 1488232 PCT
Lal17g0252 17 1568174 1571329 Lal25g1076 25 14076896 14080841 PCT
Lal4g0236 4 1483776 1488232 Lal25g1076 25 14076896 14080841 PCT