Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1441 ATGTCGACCTCTTCAATCAACGGTAATTGGGGTATCTCTTCTATCTCCCCTAACAAAACTTCTCTCAACAAACCCACATTGCGCCCTTCACTCTCTGCATCCCTTAACACTAACCCTTCTTCTTTCCCTTCTCTCATTCAAGACAAGCCTGTTTTTGCAGCCCCTTCAACCATCATCACCCCCGTTGTGGGAGAGGATATGGGTAAGAACTATGAGGAAGCTATTGAGGAACTCCAGAAACTACTAAGGGCGAAGGCTAGTCTGAAAGACACAGCAGCTGAGAAAGTAGAGCAGATAACAGCTGATTTGAGCACAGCATCATCATCAGAAGGAGTACCATCATCAGAAGCATCTGAGAGGATCAAAACTGGTTTCCTTTACTTCAAGAAAGAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTTGCCAAAGGCCAGAGCCCCAAGTTTATGGTGTTTGCTTGTTCAGACTCAAGAGTGTGCCCATCTCACGTGCTAGATTTCCAGCCAGGAGAGGCCTTTGTTGTCAGAAATGTTGCTAACATTGTCCCACCATATGACCAGTCTAAATATGCTGGAGCTGGAGCTGCTATTGAATACGCAGTTTTGCATCTCAAGGTGTCTGAGATTGTGGTCATTGGACACAGTGCTTGTGGAGGTATTAAGGGGCTTTTGTCTTTCCCATGGGATGGAAACTACACTACTGATTTCATTGAGGAATGGGTGAAAATTGGTTTACCTGCAAAGGCAAAGGTGAAAGCAGCACATGGAGATGCACCATTCGGAGAGCTATGCACACACTGTGAGAAGGAAGCTGTAAATGTTTCCCTTGGAAATTTGCTAACTTACCCATTTGTTAGAGATGGATTGGTGAACAAGACATTGGCACTTAAAGGAGGATACTATGACTTTGTTAAGGGTTCTTTTGAGCTCTGGGGCCTTCAGTTTGGCCTTGCTTCTTCTTTCTCCGTATGA 978 0.4458 MSTSSINGNWGISSISPNKTSLNKPTLRPSLSASLNTNPSSFPSLIQDKPVFAAPSTIITPVVGEDMGKNYEEAIEELQKLLRAKASLKDTAAEKVEQITADLSTASSSEGVPSSEASERIKTGFLYFKKEKYDKNPALYGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQSKYAGAGAAIEYAVLHLKVSEIVVIGHSACGGIKGLLSFPWDGNYTTDFIEEWVKIGLPAKAKVKAAHGDAPFGELCTHCEKEAVNVSLGNLLTYPFVRDGLVNKTLALKGGYYDFVKGSFELWGLQFGLASSFSV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1441 325 Pfam Carbonic anhydrase 152 309 IPR001765 GO:0004089|GO:0008270
Lal24g1441 325 MobiDBLite consensus disorder prediction 1 35 - -
Lal24g1441 325 Gene3D Carbonic anhydrase 105 325 IPR036874 GO:0004089|GO:0008270
Lal24g1441 325 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 1 325 - -
Lal24g1441 325 CDD beta_CA_cladeB 124 313 IPR045066 GO:0004089|GO:0008270
Lal24g1441 325 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 200 220 IPR015892 GO:0004089|GO:0008270|GO:0015976
Lal24g1441 325 SUPERFAMILY beta-carbonic anhydrase, cab 118 319 IPR036874 GO:0004089|GO:0008270
Lal24g1441 325 PANTHER CARBONIC ANHYDRASE 1 325 IPR001765 GO:0004089|GO:0008270
Lal24g1441 325 Coils Coil 71 98 - -
Lal24g1441 325 SMART Pro_CA_2 144 314 IPR001765 GO:0004089|GO:0008270
Lal24g1441 325 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 156 163 IPR015892 GO:0004089|GO:0008270|GO:0015976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1441 Lal-Chr24 15681019 15684588 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1441 K01673 - gmx:100500448 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1441 24 15681019 15684588 Lal17g0921 17 7284957 7306739 ECH
Lal24g1441 24 15681019 15684588 Lal24g1441 24 15681019 15684588 ECH
Lal15g0488 15 3329231 3342192 Lal24g1441 24 15681019 15684588 ECH
Lal13g1888 13 18374354 18378477 Lal24g1441 24 15681019 15684588 LSH